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Report for CCDS6088.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6088.1 Public Homo sapiens 8 FUT10 24 110 108 CCDS HistoryNCBI Gene:84750Re-query CCDS DB by CCDS ID:6088.1Re-query CCDS DB by GeneID:84750See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6088.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000327671.10 ENSP00000332757.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000327671.10Link to Ensembl Protein Viewer:ENSP00000332757.5Re-query CCDS DB by Nucleotide ID:ENST00000327671Re-query CCDS DB by Protein ID:ENSP00000332757
Original member Current member NCBI NM_032664.3 NP_116053.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032664.3Link to Protein Sequence:NP_116053.3Re-query CCDS DB by Nucleotide ID:NM_032664Re-query CCDS DB by Protein ID:NP_116053Link to BLAST:NP_116053.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116053.3 479 Q6P4F1-1 479 100% 0 0

Chromosomal Locations for CCDS 6088.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 33372577 33372804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 33388963 33389798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 33453216 33453510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 33461372 33461452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1440 nt):
ATGGTGCGGATTCAGAGGAGGAAGCTTTTGGCATCTTGCCTGTGCGTCACAGCCACCGTCTTTCTGCTTG
TCACACTCCAGGTCATGGTTGAGCTGGGGAAGTTTGAAAGGAAGGAGTTTAAAAGTTCCAGTTTGCAAGA
TGGACATACAAAAATGGAGGAAGCACCTACGCATCTTAATTCATTTCTTAAGAAAGAAGGATTGACCTTC
AACAGGAAAAGAAAATGGGAATTGGACAGCTACCCCATTATGCTCTGGTGGTCCCCGCTGACGGGGGAGA
CTGGGAGGTTAGGCCAATGTGGAGCAGATGCTTGTTTCTTCACCATCAACCGGACCTACCTCCATCATCA
CATGACCAAAGCATTCCTCTTCTATGGTACTGACTTTAACATAGATAGCTTACCTCTGCCTCGGAAAGCC
CATCATGACTGGGCTGTTTTTCATGAAGAGTCCCCGAAAAACAATTATAAGCTCTTTCATAAACCAGTGA
TCACCTTGTTCAACTACACTGCCACGTTCAGCAGGCATTCCCACTTGCCACTAACTACCCAATACTTGGA
GAGCATTGAAGTCCTGAAGTCACTCCGATACCTAGTTCCTTTGCAGTCCAAAAACAAGCTTAGAAAAAGA
CTTGCTCCGCTGGTGTATGTACAGTCAGACTGTGACCCACCATCAGACAGGGACAGCTATGTTCGCGAGC
TGATGACTTACATCGAGGTCGATTCCTATGGTGAATGTTTACGAAACAAAGACCTCCCTCAGCAGCTGAA
AAATCCAGCCTCTATGGATGCCGATGGCTTTTATAGGATCATTGCACAGTATAAGTTTATCCTAGCTTTT
GAGAATGCAGTTTGTGATGACTACATCACTGAGAAGTTCTGGAGGCCACTGAAACTGGGGGTAGTCCCTG
TATATTACGGATCCCCCAGCATCACAGACTGGCTTCCAAGTAACAAAAGTGCTATTCTTGTATCAGAATT
TTCTCACCCCAGGGAACTGGCAAGTTACATCAGACGACTGGATTCTGATGACAGATTGTATGAGGCCTAT
GTAGAATGGAAGCTGAAGGGTGAGATCTCTAACCAGCGACTTCTGACAGCTCTCAGGGAACGGAAATGGG
GAGTGCAAGACGTCAACCAGGACAATTACATCGATGCATTTGAGTGTATGGTGTGCACCAAGGTGTGGGC
TAATATCAGGCTTCAGGAAAAGGGCTTACCACCCAAAAGATGGGAGGCAGAAGATACCCACCTGAGTTGC
CCAGAGCCCACAGTGTTTGCTTTCTCACCACTCCGGACTCCACCTTTGAGCTCTTTGCGAGAGATGTGGA
TTTCCAGCTTTGAACAATCCAAGAAAGAAGCCCAGGCACTAAGGTGGCTGGTTGATAGGAATCAAAACTT
TTCATCTCAAGAGTTTTGGGGCCTAGTATTCAAGGACTGA

Translation (479 aa):
MVRIQRRKLLASCLCVTATVFLLVTLQVMVELGKFERKEFKSSSLQDGHTKMEEAPTHLNSFLKKEGLTF
NRKRKWELDSYPIMLWWSPLTGETGRLGQCGADACFFTINRTYLHHHMTKAFLFYGTDFNIDSLPLPRKA
HHDWAVFHEESPKNNYKLFHKPVITLFNYTATFSRHSHLPLTTQYLESIEVLKSLRYLVPLQSKNKLRKR
LAPLVYVQSDCDPPSDRDSYVRELMTYIEVDSYGECLRNKDLPQQLKNPASMDADGFYRIIAQYKFILAF
ENAVCDDYITEKFWRPLKLGVVPVYYGSPSITDWLPSNKSAILVSEFSHPRELASYIRRLDSDDRLYEAY
VEWKLKGEISNQRLLTALRERKWGVQDVNQDNYIDAFECMVCTKVWANIRLQEKGLPPKRWEAEDTHLSC
PEPTVFAFSPLRTPPLSSLREMWISSFEQSKKEAQALRWLVDRNQNFSSQEFWGLVFKD


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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