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Report for CCDS62198.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
62198.1 Public Homo sapiens 17 AOC3 24 110 108 CCDS HistoryNCBI Gene:8639Re-query CCDS DB by CCDS ID:62198.1Re-query CCDS DB by GeneID:8639See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 62198.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000591562.1 ENSP00000468632.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000591562.1Link to Ensembl Protein Viewer:ENSP00000468632.1Re-query CCDS DB by Nucleotide ID:ENST00000591562Re-query CCDS DB by Protein ID:ENSP00000468632
Original member Current member EBI ENST00000617500.4 ENSP00000477686.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000617500.4Link to Ensembl Protein Viewer:ENSP00000477686.1Re-query CCDS DB by Nucleotide ID:ENST00000617500Re-query CCDS DB by Protein ID:ENSP00000477686
Original member Current member NCBI NM_001277732.2 NP_001264661.1 Accepted alive Link to Nucleotide Sequence:NM_001277732.2Link to Protein Sequence:NP_001264661.1Re-query CCDS DB by Nucleotide ID:NM_001277732Re-query CCDS DB by Protein ID:NP_001264661Link to BLAST:NP_001264661.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001264661.1 220 Q16853-3 220 100% 0 0

Chromosomal Locations for CCDS 62198.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 42854477 42854733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42855444 42855573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42856275 42856550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (663 nt):
ATGGTCTTTGTCCCCATGGCTGTGCCCTGGAGCCCTGAGCACCAGCTGCAGAGGCTGCAGGTGACCCGGA
AGCTGCTGGAGATGGAGGAGCAGGCCGCCTTCCTCGTGGGAAGCGCCACCCCTCGCTACCTGTACCTGGC
CAGCAACCACAGCAACAAGTGGGGTCACCCCCGGGGCTACCGCATCCAGATGCTCAGCTTTGCTGGAGAG
CCGCTGCCCCAAAACAGCTCCATGGCGAGAGGCTTCAGCTGGGAGAGGTACCAGCTGGCTGTGACCCAGC
GGAAGGAGGAGGAGCCCAGTAGCAGCAGCGTTTTCAATCAGAATGACCCTTGGGCCCCCACTGTGGATTT
CAGTGACTTCATCAACAATGAGACCATTGCTGGAAAGGATTTGGTGGCCTGGGTGACAGCTGGTTTTCTG
CATATCCCACATGCAGAGGACATTCCTAACACAGTGACTGTGGGGAACGGCGTGGGCTTCTTCCTCCGAC
CCTATAACTTCTTTGACGAAGACCCCTCCTTCTACTCTGCCGACTCCATCTACTTCCGAGGGGACCAGGA
TGCTGGGGCCTGCGAGGTCAACCCCCTAGCTTGCCTGCCCCAGGCTGCTGCCTGTGCCCCCGACCTCCCT
GCCTTCTCCCACGGGGGCTTCTCTCACAACTAG

Translation (220 aa):
MVFVPMAVPWSPEHQLQRLQVTRKLLEMEEQAAFLVGSATPRYLYLASNHSNKWGHPRGYRIQMLSFAGE
PLPQNSSMARGFSWERYQLAVTQRKEEEPSSSSVFNQNDPWAPTVDFSDFINNETIAGKDLVAWVTAGFL
HIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDPSFYSADSIYFRGDQDAGACEVNPLACLPQAAACAPDLP
AFSHGGFSHN


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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