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Report for CCDS6352.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6352.1 Public Homo sapiens 8 NDUFB9 24 110 108 CCDS HistoryNCBI Gene:4715Re-query CCDS DB by CCDS ID:6352.1Re-query CCDS DB by GeneID:4715See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6352.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000276689.8 ENSP00000276689.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000276689.8Link to Ensembl Protein Viewer:ENSP00000276689.3Re-query CCDS DB by Nucleotide ID:ENST00000276689Re-query CCDS DB by Protein ID:ENSP00000276689
Original member Current member EBI ENST00000677021.1 ENSP00000504235.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000677021.1Link to Ensembl Protein Viewer:ENSP00000504235.1Re-query CCDS DB by Nucleotide ID:ENST00000677021Re-query CCDS DB by Protein ID:ENSP00000504235
Original member Current member NCBI NM_005005.3 NP_004996.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005005.3Link to Protein Sequence:NP_004996.1Re-query CCDS DB by Nucleotide ID:NM_005005Re-query CCDS DB by Protein ID:NP_004996Link to BLAST:NP_004996.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004996.1 179 Q9Y6M9 179 100% 0 0

Chromosomal Locations for CCDS 6352.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 124539187 124539287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124543087 124543279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124547000 124547113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124549761 124549892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (540 nt):
ATGGCGTTCTTGGCGTCGGGACCCTACCTGACCCATCAGCAAAAGGTGTTGCGGCTTTATAAGCGGGCGC
TACGCCACCTCGAGTCGTGGTGCGTCCAGAGAGACAAATACCGATACTTTGCTTGTTTGATGAGAGCCCG
GTTTGAAGAACATAAGAATGAAAAGGATATGGCGAAGGCCACCCAGCTGCTGAAGGAGGCCGAGGAAGAA
TTCTGGTACCGTCAGCATCCACAGCCATACATCTTCCCTGACTCTCCTGGGGGCACCTCCTATGAGAGAT
ACGATTGCTACAAGGTCCCAGAATGGTGCTTAGATGACTGGCATCCTTCTGAGAAGGCAATGTATCCTGA
TTACTTTGCCAAGAGAGAACAGTGGAAGAAACTGCGGAGGGAAAGCTGGGAACGAGAGGTTAAGCAGCTG
CAGGAGGAAACGCCACCTGGTGGTCCTTTAACTGAAGCTTTGCCCCCTGCCCGAAAGGAAGGTGATTTGC
CCCCACTGTGGTGGTATATTGTGACCAGACCCCGGGAGCGGCCCATGTAG

Translation (179 aa):
MAFLASGPYLTHQQKVLRLYKRALRHLESWCVQRDKYRYFACLMRARFEEHKNEKDMAKATQLLKEAEEE
FWYRQHPQPYIFPDSPGGTSYERYDCYKVPEWCLDDWHPSEKAMYPDYFAKREQWKKLRRESWEREVKQL
QEETPPGGPLTEALPPARKEGDLPPLWWYIVTRPRERPM


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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