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Report for CCDS7335.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7335.1 Public Homo sapiens 10 NDST2 24 110 108 CCDS HistoryNCBI Gene:8509Re-query CCDS DB by CCDS ID:7335.1Re-query CCDS DB by GeneID:8509See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7335.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000299641.8 ENSP00000299641.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000299641.8Link to Ensembl Protein Viewer:ENSP00000299641.5Re-query CCDS DB by Nucleotide ID:ENST00000299641Re-query CCDS DB by Protein ID:ENSP00000299641
Original member Current member EBI ENST00000309979.11 ENSP00000310657.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000309979.11Link to Ensembl Protein Viewer:ENSP00000310657.6Re-query CCDS DB by Nucleotide ID:ENST00000309979Re-query CCDS DB by Protein ID:ENSP00000310657
Original member Current member NCBI NM_003635.4 NP_003626.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003635.4Link to Protein Sequence:NP_003626.1Re-query CCDS DB by Nucleotide ID:NM_003635Re-query CCDS DB by Protein ID:NP_003626Link to BLAST:NP_003626.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003626.1 883 P52849-1 883 100% 0 0

Chromosomal Locations for CCDS 7335.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 73802451 73802576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73802674 73802776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73802972 73803081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73803189 73803359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73803574 73803748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73803893 73804016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73804773 73804869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73805587 73805769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73805900 73806028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73806289 73806474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73806657 73806811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73807108 73807195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73807384 73808388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2652 nt):
ATGCTCCAGTTGTGGAAGGTGGTACGCCCAGCTCGGCAGCTGGAACTGCACCGCCTCATACTGCTGCTGA
TCGCTTTCAGCCTGGGCTCCATGGGCTTCCTGGCTTATTATGTGTCCACCAGCCCTAAGGCCAAGGAACC
CTTGCCCCTGCCCTTGGGAGACTGCAGCAGCGGTGGGGCAGCTGGTCCTGGCCCTGCACGGCCTCCAGTT
CCACCTCGGCCCCCCAGGCCTCCAGAGACAGCTCGAACTGAACCCGTGGTCCTTGTGTTTGTGGAGAGTG
CATACTCACAGCTGGGGCAGGAAATTGTGGCCATCCTGGAGTCTAGTCGTTTTCGTTATAGCACTGAGTT
GGCACCTGGCCGAGGGGACATGCCCACATTGACTGATAATACCCATGGCCGCTATGTCTTGGTCATTTAT
GAGAACCTGCTCAAGTATGTCAACCTGGATGCCTGGAGTCGGGAACTGCTAGACCGGTACTGCGTGGAGT
ATGGTGTGGGCATCATTGGCTTTTTCCGAGCCCACGAGCACAGCCTACTGAGCGCCCAGCTCAAGGGCTT
TCCCCTTTTTTTACACTCAAACTTGGGGCTCCGGGACTACCAAGTGAATCCTTCTGCCCCGCTACTGCAT
CTCACACGCCCCAGCCGCCTAGAACCAGGGCCACTGCCTGGTGATGACTGGACCATCTTCCAATCCAATC
ATAGTACATATGAACCAGTGCTTCTTGCCAGCCTTCGGCCAGCTGAGCCCGCAGTGCCAGGACCAGTTCT
TCGTCGGGCCCGGCTTCCCACTGTGGTACAGGACCTGGGGCTTCATGATGGCATCCAGCGGGTGCTCTTT
GGACATGGCCTTTCCTTCTGGCTCCACAAACTTATCTTCGTTGATGCTGTTGCATACCTCACTGGCAAGC
GCCTCTGCCTGGACCTTGACCGCTACATCTTGGTAGACATCGATGACATCTTTGTGGGCAAGGAAGGGAC
CCGCATGAAGGTGGCTGATGTTGAGGCTCTGTTGACCACCCAGAACAAACTCAGGACCTTAGTTCCCAAC
TTCACCTTCAACTTGGGCTTCTCGGGCAAGTTCTATCATACTGGGACAGAGGAGGAGGATGCAGGGGACG
ACATGCTGCTGAAGCACCGCAAAGAGTTCTGGTGGTTCCCCCACATGTGGAGCCACATGCAGCCACACCT
GTTCCACAATCGCTCCGTGCTGGCTGACCAGATGAGGCTCAACAAACAGTTTGCTCTGGAGCATGGGATT
CCCACGGACCTGGGGTATGCTGTGGCCCCCCACCACTCGGGTGTGTACCCCATCCACACGCAGCTCTATG
AGGCCTGGAAATCCGTGTGGGGCATCCAGGTGACCAGCACTGAGGAGTATCCCCATCTCCGCCCTGCCCG
CTACCGCCGTGGCTTCATTCACAATGGCATTATGGTGCTGCCCCGGCAGACATGTGGCCTCTTCACTCAC
ACAATCTTCTATAATGAGTATCCTGGAGGCTCTCGTGAACTAGACCGGAGCATCCGAGGTGGAGAGCTCT
TTCTGACAGTGCTGCTTAATCCGATCAGCATCTTTATGACCCATCTGTCCAATTATGGAAATGACCGGCT
GGGCCTATACACCTTTGAGAGCTTGGTGCGCTTCCTCCAGTGTTGGACACGGCTGCGCCTACAGACCCTT
CCTCCTGTCCCACTTGCACAGAAGTACTTTGAACTTTTCCCTCAGGAGCGAAGCCCCCTTTGGCAGAATC
CCTGTGATGACAAGAGGCACAAAGATATCTGGTCCAAGGAGAAAACCTGTGATCGTCTCCCGAAGTTCCT
CATTGTGGGACCCCAGAAAACAGGGACTACAGCTATTCACTTCTTCCTGAGCCTGCACCCAGCTGTAACT
AGCAGCTTCCCTAGCCCCAGCACATTTGAGGAGATTCAGTTCTTCAACAGCCCTAATTACCACAAGGGTA
TTGACTGGTACATGGATTTCTTCCCTGTTCCTTCCAATGCCAGCACTGATTTCCTATTTGAAAAAAGTGC
CACCTACTTTGACTCTGAAGTTGTACCACGGCGGGGGGCTGCCCTCCTGCCACGAGCCAAGATCATCACA
GTGCTCACCAACCCTGCTGACAGGGCCTACTCCTGGTACCAGCATCAGCGAGCCCATGGAGACCCAGTTG
CTCTGAACTATACCTTCTATCAGGTGATTTCAGCCTCCTCCCAGACCCCTCTGGCACTACGCTCCCTGCA
GAACCGCTGTCTTGTCCCTGGCTACTATTCTACCCATCTACAACGCTGGCTGACTTACTACCCCTCTGGA
CAGTTGCTGATTGTGGATGGGCAAGAGCTGCGTACCAACCCAGCAGCCTCAATGGAGAGCATCCAGAAGT
TCCTGGGTATCACACCCTTTCTGAACTACACACGGACCCTCAGGTTTGATGATGATAAGGGATTTTGGTG
CCAGGGACTTGAAGGTGGTAAGACTCGCTGTCTAGGCCGGAGCAAAGGCCGGAGGTATCCAGATATGGAC
ACTGAGTCCCGTCTTTTCCTTACGGATTTTTTCCGGAACCATAATTTGGAGTTGTCGAAGCTGCTGAGCC
GGCTTGGACAGCCAGTGCCCTCGTGGCTTCGGGAAGAACTGCAGCATTCCAGTCTGGGCTGA

Translation (883 aa):
MLQLWKVVRPARQLELHRLILLLIAFSLGSMGFLAYYVSTSPKAKEPLPLPLGDCSSGGAAGPGPARPPV
PPRPPRPPETARTEPVVLVFVESAYSQLGQEIVAILESSRFRYSTELAPGRGDMPTLTDNTHGRYVLVIY
ENLLKYVNLDAWSRELLDRYCVEYGVGIIGFFRAHEHSLLSAQLKGFPLFLHSNLGLRDYQVNPSAPLLH
LTRPSRLEPGPLPGDDWTIFQSNHSTYEPVLLASLRPAEPAVPGPVLRRARLPTVVQDLGLHDGIQRVLF
GHGLSFWLHKLIFVDAVAYLTGKRLCLDLDRYILVDIDDIFVGKEGTRMKVADVEALLTTQNKLRTLVPN
FTFNLGFSGKFYHTGTEEEDAGDDMLLKHRKEFWWFPHMWSHMQPHLFHNRSVLADQMRLNKQFALEHGI
PTDLGYAVAPHHSGVYPIHTQLYEAWKSVWGIQVTSTEEYPHLRPARYRRGFIHNGIMVLPRQTCGLFTH
TIFYNEYPGGSRELDRSIRGGELFLTVLLNPISIFMTHLSNYGNDRLGLYTFESLVRFLQCWTRLRLQTL
PPVPLAQKYFELFPQERSPLWQNPCDDKRHKDIWSKEKTCDRLPKFLIVGPQKTGTTAIHFFLSLHPAVT
SSFPSPSTFEEIQFFNSPNYHKGIDWYMDFFPVPSNASTDFLFEKSATYFDSEVVPRRGAALLPRAKIIT
VLTNPADRAYSWYQHQRAHGDPVALNYTFYQVISASSQTPLALRSLQNRCLVPGYYSTHLQRWLTYYPSG
QLLIVDGQELRTNPAASMESIQKFLGITPFLNYTRTLRFDDDKGFWCQGLEGGKTRCLGRSKGRRYPDMD
TESRLFLTDFFRNHNLELSKLLSRLGQPVPSWLREELQHSSLG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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