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Report for CCDS74568.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74568.1 Public Homo sapiens 2 DBI 24 110 108 CCDS HistoryNCBI Gene:1622Re-query CCDS DB by CCDS ID:74568.1Re-query CCDS DB by GeneID:1622See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 74568.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000535617.5 ENSP00000442917.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000535617.5Link to Ensembl Protein Viewer:ENSP00000442917.2Re-query CCDS DB by Nucleotide ID:ENST00000535617Re-query CCDS DB by Protein ID:ENSP00000442917
Original member Current member NCBI NM_001178043.4 NP_001171514.1 Accepted alive Link to Nucleotide Sequence:NM_001178043.4Link to Protein Sequence:NP_001171514.1Re-query CCDS DB by Nucleotide ID:NM_001178043Re-query CCDS DB by Protein ID:NP_001171514Link to BLAST:NP_001171514.1

Chromosomal Locations for CCDS 74568.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 119367052 119367090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119368188 119368305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119370740 119370802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119372245 119372318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (294 nt):
ATGTCTCAGGTACAGCGCGTGCACAGCCAGGCTGCGAAGGCTGAGTTTGAGAAAGCTGCAGAGGAGGTTA
GGCACCTTAAGACCAAGCCATCGGATGAGGAGATGCTGTTCATCTATGGCCACTACAAACAAGCAACTGT
GGGCGACATAAATACAGAACGGCCCGGGATGTTGGACTTCACGGGCAAGGCCAAGTGGGATGCCTGGAAT
GAGCTGAAAGGGACTTCCAAGGAAGATGCCATGAAAGCTTACATCAACAAAGTAGAAGAGCTAAAGAAAA
AATACGGGATATGA

Translation (97 aa):
MSQVQRVHSQAAKAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWN
ELKGTSKEDAMKAYINKVEELKKKYGI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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