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Report for CCDS75967.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75967.1 Public Homo sapiens X SLC9A7 24 110 108 CCDS HistoryNCBI Gene:84679Re-query CCDS DB by CCDS ID:75967.1Re-query CCDS DB by GeneID:84679See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75967.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000616978.5 ENSP00000480916.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000616978.5Link to Ensembl Protein Viewer:ENSP00000480916.1Re-query CCDS DB by Nucleotide ID:ENST00000616978Re-query CCDS DB by Protein ID:ENSP00000480916
Original member Current member NCBI NM_001257291.2 NP_001244220.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001257291.2Link to Protein Sequence:NP_001244220.1Re-query CCDS DB by Nucleotide ID:NM_001257291Re-query CCDS DB by Protein ID:NP_001244220Link to BLAST:NP_001244220.1

Chromosomal Locations for CCDS 75967.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 46606952 46607203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46613289 46613394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46620977 46621059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46631586 46631649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46635589 46635648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46643236 46643389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46648686 46648797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46651110 46651223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46651316 46651404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46653609 46653714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46662016 46662157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46662538 46662643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46669607 46669719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46672551 46672627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46679678 46679755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46682336 46682535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46758705 46759029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2181 nt):
ATGGAGCCTGGTGACGCGGCGCGCCCTGGCTCGGGTCGGGCTACCGGGGCGCCGCCGCCGCGGCTGCTGC
TGCTGCCGCTGCTGCTGGGTTGGGGGCTGCGAGTCGCGGCCGCGGCCTCGGCCTCCTCCTCTGGGGCGGC
GGCGGAGGACAGCAGCGCCATGGAGGAGCTCGCTACTGAGAAGGAGGCGGAGGAGAGCCACCGGCAAGAC
AGCGTGAGCCTGCTCACCTTCATCCTGCTGCTCACGCTCACCATCCTCACCATCTGGCTCTTCAAGCACC
GCCGGGTGCGCTTTCTGCACGAGACCGGGCTGGCCATGATCTATGGGCTCATCGTTGGGGTGATCCTGAG
GTATGGTACCCCTGCTACCAGTGGCCGTGACAAATCACTCAGCTGCACTCAGGAAGACAGGGCCTTCAGT
ACCTTATTAGTGAATGTCAGCGGAAAGTTCTTCGAATACACTCTGAAAGGAGAAATCAGTCCTGGCAAGA
TCAACAGCGTAGAGCAGAATGATATGCTACGGAAGGTAACATTCGATCCAGAAGTATTTTTCAACATTCT
TCTGCCTCCAATTATTTTTCATGCTGGATACAGCTTAAAGAAGAGACACTTTTTCAGAAATCTTGGATCT
ATACTGGCCTATGCCTTCTTGGGGACTGCTGTTTCATGCTTCATTATTGGAAATCTCATGTATGGTGTGG
TGAAGCTCATGAAGATTATGGGACAGCTCTCAGATAAATTTTACTACACAGATTGTCTCTTTTTTGGAGC
AATCATCTCTGCCACTGACCCAGTGACTGTGCTGGCGATATTTAATGAATTGCATGCAGACGTGGATCTT
TACGCACTTCTTTTTGGAGAGAGCGTCCTAAATGATGCTGTTGCCATTGTACTGTCCTCGTCTATTGTTG
CCTACCAGCCAGCGGGACTGAACACTCACGCCTTTGATGCTGCTGCCTTTTTTAAGTCAGTTGGCATTTT
TCTAGGTATATTTAGTGGCTCTTTTACCATGGGAGCTGTGACTGGTGTTGTGACTGCTCTAGTGACTAAG
TTTACCAAACTGCACTGCTTCCCCCTGCTGGAGACGGCGCTGTTCTTCCTCATGTCCTGGAGCACGTTTC
TCTTGGCAGAAGCCTGCGGATTTACAGGTGTTGTAGCTGTCCTTTTCTGTGGAATCACACAAGCTCATTA
CACCTACAACAATCTGTCGGTGGAATCAAGAAGTCGAACCAAGCAGCTCTTTGAGGTGTTACATTTCCTG
GCAGAGAACTTCATCTTCTCCTACATGGGCCTGGCACTGTTTACCTTCCAGAAGCACGTTTTCAGCCCCA
TTTTCATCATCGGAGCTTTTGTTGCCATCTTCCTGGGCAGAGCCGCGCACATCTACCCGCTCTCCTTCTT
CCTCAACTTGGGCAGAAGGCATAAGATTGGCTGGAATTTTCAACACATGATGATGTTTTCAGGCCTCAGG
GGAGCAATGGCATTTGCGTTGGCCATCCGTGACACGGCATCCTATGCTCGCCAGATGATGTTCACGACCA
CCCTTCTCATTGTGTTCTTCACTGTCTGGATCATTGGAGGAGGCACGACACCCATGTTGTCATGGCTTAA
CATCAGAGTTGGCGTCGAGGAGCCCTCCGAAGAGGACCAGAATGAACACCACTGGCAGTACTTCAGAGTT
GGTGTTGACCCCGATCAAGACCCACCACCCAACAACGACAGCTTTCAAGTCTTACAAGGGGACGGCCCAG
ATTCTGCCAGAGGAAACCGGACAAAACAGGAGAGCGCATGGATATTCAGGCTGTGGTACAGCTTTGATCA
CAATTACCTGAAGCCCATCCTCACACACAGTGGTCCCCCACTAACCACCACGCTCCCCGCCTGGTGTGGC
TTACTAGCTCGATGTCTGACCAGTCCCCAGGTGTACGATAACCAAGAGCCACTGAGAGAGGAAGACTCTG
ATTTCATCCTGACCGAAGGCGACCTGACATTGACCTACGGGGACAGCACAGTGACTGCAAATGGCTCCTC
AAGTTCGCACACCGCCTCCACGAGTCTGGAGGGCAGCCGGAGAACGAAGAGCAGCTCGGAGGAAGTGCTG
GAGCGAGACCTGGGAATGGGAGACCAGAAGGTTTCGAGCCGGGGCACCCGCCTAGTGTTTCCCCTGGAAG
ATAATGCTTGA

Translation (726 aa):
MEPGDAARPGSGRATGAPPPRLLLLPLLLGWGLRVAAAASASSSGAAAEDSSAMEELATEKEAEESHRQD
SVSLLTFILLLTLTILTIWLFKHRRVRFLHETGLAMIYGLIVGVILRYGTPATSGRDKSLSCTQEDRAFS
TLLVNVSGKFFEYTLKGEISPGKINSVEQNDMLRKVTFDPEVFFNILLPPIIFHAGYSLKKRHFFRNLGS
ILAYAFLGTAVSCFIIGNLMYGVVKLMKIMGQLSDKFYYTDCLFFGAIISATDPVTVLAIFNELHADVDL
YALLFGESVLNDAVAIVLSSSIVAYQPAGLNTHAFDAAAFFKSVGIFLGIFSGSFTMGAVTGVVTALVTK
FTKLHCFPLLETALFFLMSWSTFLLAEACGFTGVVAVLFCGITQAHYTYNNLSVESRSRTKQLFEVLHFL
AENFIFSYMGLALFTFQKHVFSPIFIIGAFVAIFLGRAAHIYPLSFFLNLGRRHKIGWNFQHMMMFSGLR
GAMAFALAIRDTASYARQMMFTTTLLIVFFTVWIIGGGTTPMLSWLNIRVGVEEPSEEDQNEHHWQYFRV
GVDPDQDPPPNNDSFQVLQGDGPDSARGNRTKQESAWIFRLWYSFDHNYLKPILTHSGPPLTTTLPAWCG
LLARCLTSPQVYDNQEPLREEDSDFILTEGDLTLTYGDSTVTANGSSSSHTASTSLEGSRRTKSSSEEVL
ERDLGMGDQKVSSRGTRLVFPLEDNA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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