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Report for CCDS76046.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76046.1 Public Homo sapiens X MAGEA2B 24 110 108 CCDS HistoryNCBI Gene:266740Re-query CCDS DB by CCDS ID:76046.1Re-query CCDS DB by GeneID:266740See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76046.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000331220.6 ENSP00000333487.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000331220.6Link to Ensembl Protein Viewer:ENSP00000333487.2Re-query CCDS DB by Nucleotide ID:ENST00000331220Re-query CCDS DB by Protein ID:ENSP00000333487
Original member Current member EBI ENST00000370293.6 ENSP00000359316.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000370293.6Link to Ensembl Protein Viewer:ENSP00000359316.2Re-query CCDS DB by Nucleotide ID:ENST00000370293Re-query CCDS DB by Protein ID:ENSP00000359316
Original member Current member EBI ENST00000682532.1 ENSP00000507594.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000682532.1Link to Ensembl Protein Viewer:ENSP00000507594.1Re-query CCDS DB by Nucleotide ID:ENST00000682532Re-query CCDS DB by Protein ID:ENSP00000507594
Original member Current member NCBI NM_001321400.1 NP_001308329.1 Accepted alive Link to Nucleotide Sequence:NM_001321400.1Link to Protein Sequence:NP_001308329.1Re-query CCDS DB by Nucleotide ID:NM_001321400Re-query CCDS DB by Protein ID:NP_001308329Link to BLAST:NP_001308329.1
Original member Current member NCBI NM_001321401.1 NP_001308330.1 Accepted alive Link to Nucleotide Sequence:NM_001321401.1Link to Protein Sequence:NP_001308330.1Re-query CCDS DB by Nucleotide ID:NM_001321401Re-query CCDS DB by Protein ID:NP_001308330Link to BLAST:NP_001308330.1
Original member Current member NCBI NM_001321402.1 NP_001308331.1 Accepted alive Link to Nucleotide Sequence:NM_001321402.1Link to Protein Sequence:NP_001308331.1Re-query CCDS DB by Nucleotide ID:NM_001321402Re-query CCDS DB by Protein ID:NP_001308331Link to BLAST:NP_001308331.1
Original member Current member NCBI NM_001321403.1 NP_001308332.1 Accepted alive Link to Nucleotide Sequence:NM_001321403.1Link to Protein Sequence:NP_001308332.1Re-query CCDS DB by Nucleotide ID:NM_001321403Re-query CCDS DB by Protein ID:NP_001308332Link to BLAST:NP_001308332.1
Original member Current member NCBI NM_001321404.1 NP_001308333.1 Accepted alive Link to Nucleotide Sequence:NM_001321404.1Link to Protein Sequence:NP_001308333.1Re-query CCDS DB by Nucleotide ID:NM_001321404Re-query CCDS DB by Protein ID:NP_001308333Link to BLAST:NP_001308333.1
Original member Current member NCBI NM_001386132.1 NP_001373061.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001386132.1Link to Protein Sequence:NP_001373061.1Re-query CCDS DB by Nucleotide ID:NM_001386132Re-query CCDS DB by Protein ID:NP_001373061Link to BLAST:NP_001373061.1
Original member Current member NCBI NM_153488.4 NP_705692.1 Accepted alive Link to Nucleotide Sequence:NM_153488.4Link to Protein Sequence:NP_705692.1Re-query CCDS DB by Nucleotide ID:NM_153488Re-query CCDS DB by Protein ID:NP_705692Link to BLAST:NP_705692.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001308329.1 314 P43356 314 100% 0 0
NP_001308330.1 314 P43356 314 100% 0 0
NP_001308331.1 314 P43356 314 100% 0 0
NP_001308332.1 314 P43356 314 100% 0 0
NP_001308333.1 314 P43356 314 100% 0 0
NP_001373061.1 314 P43356 314 100% 0 0
NP_705692.1 314 P43356 314 100% 0 0

Chromosomal Locations for CCDS 76046.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 152717107 152718051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGCCTCTTGAGCAGAGGAGTCAGCACTGCAAGCCTGAAGAAGGCCTTGAGGCCCGAGGAGAGGCCCTGG
GC
CTGGTGGGTGCGCAGGCTCCTGCTACTGAGGAGCAGCAGACCGCTTCTTCCTCTTCTACTCTAGTGGA
A
GTTACCCTGGGGGAGGTGCCTGCTGCCGACTCACCGAGTCCTCCCCACAGTCCTCAGGGAGCCTCCAGC
TTC
TCGACTACCATCAACTACACTCTTTGGAGACAATCCGATGAGGGCTCCAGCAACCAAGAAGAGGAGG
GG
CCAAGAATGTTTCCCGACCTGGAGTCCGAGTTCCAAGCAGCAATCAGTAGGAAGATGGTTGAGTTGGT
T
CATTTTCTGCTCCTCAAGTATCGAGCCAGGGAGCCGGTCACAAAGGCAGAAATGCTGGAGAGTGTCCTC
AGA
AATTGCCAGGACTTCTTTCCCGTGATCTTCAGCAAAGCCTCCGAGTACTTGCAGCTGGTCTTTGGCA
TC
GAGGTGGTGGAAGTGGTCCCCATCAGCCACTTGTACATCCTTGTCACCTGCCTGGGCCTCTCCTACGA
T
GGCCTGCTGGGCGACAATCAGGTCATGCCCAAGACAGGCCTCCTGATAATCGTCCTGGCCATAATCGCA
ATA
GAGGGCGACTGTGCCCCTGAGGAGAAAATCTGGGAGGAGCTGAGTATGTTGGAGGTGTTTGAGGGGA
GG
GAGGACAGTGTCTTCGCACATCCCAGGAAGCTGCTCATGCAAGATCTGGTGCAGGAAAACTACCTGGA
G
TACCGGCAGGTGCCCGGCAGTGATCCTGCATGCTACGAGTTCCTGTGGGGTCCAAGGGCCCTCATTGAA
ACC
AGCTATGTGAAAGTCCTGCACCATACACTAAAGATCGGTGGAGAACCTCACATTTCCTACCCACCCC
TG
CATGAACGGGCTTTGAGAGAGGGAGAAGAGTGA


Translation (314 aa):
MPLEQRSQHCKPEEGLEARGEALGLVGAQAPATEEQQTASSSSTLVEVTLGEVPAADSPSPPHSPQGASS
F
STTINYTLWRQSDEGSSNQEEEGPRMFPDLESEFQAAISRKMVELVHFLLLKYRAREPVTKAEMLESVL
R
NCQDFFPVIFSKASEYLQLVFGIEVVEVVPISHLYILVTCLGLSYDGLLGDNQVMPKTGLLIIVLAIIA
I
EGDCAPEEKIWEELSMLEVFEGREDSVFAHPRKLLMQDLVQENYLEYRQVPGSDPACYEFLWGPRALIE
T
SYVKVLHHTLKIGGEPHISYPPLHERALREGEE




Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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