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Report for CCDS77464.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77464.1 Public Homo sapiens 2 ACMSD 24 110 108 CCDS HistoryNCBI Gene:130013Re-query CCDS DB by CCDS ID:77464.1Re-query CCDS DB by GeneID:130013See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77464.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000392928.5 ENSP00000376659.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392928.5Link to Ensembl Protein Viewer:ENSP00000376659.1Re-query CCDS DB by Nucleotide ID:ENST00000392928Re-query CCDS DB by Protein ID:ENSP00000376659
Original member Current member NCBI NM_001307983.2 NP_001294912.1 Accepted alive Link to Nucleotide Sequence:NM_001307983.2Link to Protein Sequence:NP_001294912.1Re-query CCDS DB by Nucleotide ID:NM_001307983Re-query CCDS DB by Protein ID:NP_001294912Link to BLAST:NP_001294912.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001294912.1 278 Q8TDX5-2 278 100% 0 0

Chromosomal Locations for CCDS 77464.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 134859283 134859357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 134863395 134863631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 134867579 134867672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 134870965 134871060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 134872469 134872641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 134898341 134898439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 134901798 134901860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (837 nt):
ATGGGAAAGTCTTCAGAGTGGTGCGAGAGAATTGCTGGGATCCAGAAGTTCGTATTAGAGAAATGGACCA
AAAAGGCCAAACCTGAGGACACTTTAAACCTGTGCCAGCTTTTAAACAACGACCTTGCCAGCACCGTTGT
GAGCTACCCCAGGAGGTTCGTGGGTCTGGGGACGTTGCCCATGCAGGCCCCTGAGCTGGCGGTCAAGGAG
ATGGAGCGCTGTGTGAAAGAGCTGGGCTTTCCCGGGGTCCAAATTGGCACCCACGTCAACGAGTGGGACC
TGAACGCGCAGGAGCTCTTTCCTGTCTATGCGGCAGCCGAAAGGCTGAAGTGTTCCCTGTTCGTGCATCC
CTGGGACATGCAGATGGATGGACGAATGGCCAAATACTGGCTCCCTTGGCTTGTAGGAATGCCAGCAGAG
ACCACCATAGCCATTTGCTCCATGATCATGGGTGGAGTATTTGAGAAGTTTCCCAAACTGAAAGTGTGTT
TCGCACATGGTGGTGGTGCCTTCCCCTTCACAGTGGGAAGAATCTCCCATGGATTCAGCATGCGCCCAGA
TCTGTGTGCCCAGGACAACCCCATGAACCCGAAGAAATACCTTGGTTCCTTTTACACAGATGCTTTGGTT
CATGATCCTCTGTCCCTCAAGCTGTTAACAGATGTCATAGGAAAGGATAAAGTCATTTTGGGAACCGATT
ACCCCTTTCCACTAGGTGAGCTGGAACCTGGGAAACTAATAGAGTCCATGGAAGAATTTGATGAAGAAAC
AAAGAATAAACTCAAAGCCGGCAATGCCCTGGCATTTTTGGGTCTTGAGAGAAAACAATTTGAATGA

Translation (278 aa):
MGKSSEWCERIAGIQKFVLEKWTKKAKPEDTLNLCQLLNNDLASTVVSYPRRFVGLGTLPMQAPELAVKE
MERCVKELGFPGVQIGTHVNEWDLNAQELFPVYAAAERLKCSLFVHPWDMQMDGRMAKYWLPWLVGMPAE
TTIAICSMIMGGVFEKFPKLKVCFAHGGGAFPFTVGRISHGFSMRPDLCAQDNPMNPKKYLGSFYTDALV
HDPLSLKLLTDVIGKDKVILGTDYPFPLGELEPGKLIESMEEFDEETKNKLKAGNALAFLGLERKQFE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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