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Report for CCDS77733.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77733.1 Public Homo sapiens 3 NME6 24 110 108 CCDS HistoryNCBI Gene:10201Re-query CCDS DB by CCDS ID:77733.1Re-query CCDS DB by GeneID:10201See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77733.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000435684.5 ENSP00000393261.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000435684.5Link to Ensembl Protein Viewer:ENSP00000393261.1Re-query CCDS DB by Nucleotide ID:ENST00000435684Re-query CCDS DB by Protein ID:ENSP00000393261
Original member Current member EBI ENST00000451657.6 ENSP00000407933.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000451657.6Link to Ensembl Protein Viewer:ENSP00000407933.1Re-query CCDS DB by Nucleotide ID:ENST00000451657Re-query CCDS DB by Protein ID:ENSP00000407933
Original member Current member NCBI NM_001308431.2 NP_001295360.1 Accepted alive Link to Nucleotide Sequence:NM_001308431.2Link to Protein Sequence:NP_001295360.1Re-query CCDS DB by Nucleotide ID:NM_001308431Re-query CCDS DB by Protein ID:NP_001295360Link to BLAST:NP_001295360.1
Original member Current member NCBI NM_001308433.2 NP_001295362.1 Accepted alive Link to Nucleotide Sequence:NM_001308433.2Link to Protein Sequence:NP_001295362.1Re-query CCDS DB by Nucleotide ID:NM_001308433Re-query CCDS DB by Protein ID:NP_001295362Link to BLAST:NP_001295362.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001295360.1 163 O75414-3 163 100% 0 0
NP_001295362.1 163 O75414-3 163 100% 0 0

Chromosomal Locations for CCDS 77733.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 48294666 48294803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 48295075 48295235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 48296727 48296829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 48298427 48298516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (492 nt):
ATGGCCTCAATCTTGCGAAGCCCTCAGGCTCTCCAGCTCACTCTAGCCCTGATCAAGCCTGACGCAGTCG
CCCATCCACTGATTCTGGAGGCTGTTCATCAGCAGATTCTAAGCAACAAGTTCCTGATTGTACGAATGAG
AGAACTACTGTGGAGAAAGGAAGATTGCCAGAGGTTTTACCGAGAGCATGAAGCGGGCCAATCCGAGCCT
ACATCCTTGCCCACAAGGATGCCATCCAGCTCTGGAGGACGCTCATGGGACCCACCAGAGTGTTCCGAGC
ACGCCATGTGGCCCCAGATTCTATCCGTGGGAGTTTCGGCCTCACTGACACCCGCAACACCACCCATGGT
TCGGACTCTGTGGTTTCAGCCAGCAGAGAGATTGCAGCCTTCTTCCCTGACTTCAGTGAACAGCGCTGGT
ATGAGGAGGAAGAGCCCCAGTTGCGCTGTGGCCCTGTGTGCTATAGCCCAGAGGGAGGTGTCCACTATGT
AG

Translation (163 aa):
MASILRSPQALQLTLALIKPDAVAHPLILEAVHQQILSNKFLIVRMRELLWRKEDCQRFYREHEAGQSEP
TSLPTRMPSSSGGRSWDPPECSEHAMWPQILSVGVSASLTPATPPMVRTLWFQPAERLQPSSLTSVNSAG
MRRKSPSCAVALCAIAQREVSTM


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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