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Report for CCDS77734.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77734.1 Public Homo sapiens 3 NME6 24 110 108 CCDS HistoryNCBI Gene:10201Re-query CCDS DB by CCDS ID:77734.1Re-query CCDS DB by GeneID:10201See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77734.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000452211.5 ENSP00000392352.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000452211.5Link to Ensembl Protein Viewer:ENSP00000392352.1Re-query CCDS DB by Nucleotide ID:ENST00000452211Re-query CCDS DB by Protein ID:ENSP00000392352
Original member Current member EBI ENST00000415053.5 ENSP00000399582.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000415053.5Link to Ensembl Protein Viewer:ENSP00000399582.1Re-query CCDS DB by Nucleotide ID:ENST00000415053Re-query CCDS DB by Protein ID:ENSP00000399582
Original member Current member EBI ENST00000442597.6 ENSP00000406642.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000442597.6Link to Ensembl Protein Viewer:ENSP00000406642.1Re-query CCDS DB by Nucleotide ID:ENST00000442597Re-query CCDS DB by Protein ID:ENSP00000406642
Original member Current member EBI ENST00000426689.6 ENSP00000440286.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000426689.6Link to Ensembl Protein Viewer:ENSP00000440286.1Re-query CCDS DB by Nucleotide ID:ENST00000426689Re-query CCDS DB by Protein ID:ENSP00000440286
Original member Current member EBI ENST00000643457.1 ENSP00000495130.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000643457.1Link to Ensembl Protein Viewer:ENSP00000495130.1Re-query CCDS DB by Nucleotide ID:ENST00000643457Re-query CCDS DB by Protein ID:ENSP00000495130
Original member Current member NCBI NM_001308426.2 NP_001295355.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001308426.2Link to Protein Sequence:NP_001295355.1Re-query CCDS DB by Nucleotide ID:NM_001308426Re-query CCDS DB by Protein ID:NP_001295355Link to BLAST:NP_001295355.1
Original member Current member NCBI NM_001308427.2 NP_001295356.1 Accepted alive Link to Nucleotide Sequence:NM_001308427.2Link to Protein Sequence:NP_001295356.1Re-query CCDS DB by Nucleotide ID:NM_001308427Re-query CCDS DB by Protein ID:NP_001295356Link to BLAST:NP_001295356.1
Original member Current member NCBI NM_001308428.2 NP_001295357.1 Accepted alive Link to Nucleotide Sequence:NM_001308428.2Link to Protein Sequence:NP_001295357.1Re-query CCDS DB by Nucleotide ID:NM_001308428Re-query CCDS DB by Protein ID:NP_001295357Link to BLAST:NP_001295357.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001295355.1 186 O75414-1 186 100% 0 0
NP_001295356.1 186 O75414-1 186 100% 0 0
NP_001295357.1 186 O75414-1 186 100% 0 0

Chromosomal Locations for CCDS 77734.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 48294637 48294803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 48295075 48295235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 48296119 48296158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 48296727 48296829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 48298427 48298516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (561 nt):
ATGGCCTCAATCTTGCGAAGCCCTCAGGCTCTCCAGCTCACTCTAGCCCTGATCAAGCCTGACGCAGTCG
CC
CATCCACTGATTCTGGAGGCTGTTCATCAGCAGATTCTAAGCAACAAGTTCCTGATTGTACGAATGAG
A
GAACTACTGTGGAGAAAGGAAGATTGCCAGAGGTTTTACCGAGAGCATGAAGGGCGTTTTTTCTATCAG
AGG
CTGGTGGAGTTCATGGCCAGCGGGCCAATCCGAGCCTACATCCTTGCCCACAAGGATGCCATCCAGC
TC
TGGAGGACGCTCATGGGACCCACCAGAGTGTTCCGAGCACGCCATGTGGCCCCAGATTCTATCCGTGG
G
AGTTTCGGCCTCACTGACACCCGCAACACCACCCATGGTTCGGACTCTGTGGTTTCAGCCAGCAGAGAG
ATT
GCAGCCTTCTTCCCTGACTTCAGTGAACAGCGCTGGTATGAGGAGGAAGAGCCCCAGTTGCGCTGTG
GC
CCTGTGTGCTATAGCCCAGAGGGAGGTGTCCACTATGTAGCTGGAACAGGAGGCCTAGGACCAGCCTG
A


Translation (186 aa):
MASILRSPQALQLTLALIKPDAVAHPLILEAVHQQILSNKFLIVRMRELLWRKEDCQRFYREHEGRFFYQ
R
LVEFMA
SGPIRAYILAHKDAIQLWRTLMGPTRVFRARHVAPDSIRGSFGLTDTRNTTHGSDSVVSASRE
I
AAFFPDFSEQRWYEEEEPQLRCGPVCYSPEGGVHYVAGTGGLGPA




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