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Report for CCDS78494.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
78494.1 Public Homo sapiens X UPRT 24 110 108 CCDS HistoryNCBI Gene:139596Re-query CCDS DB by CCDS ID:78494.1Re-query CCDS DB by GeneID:139596See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 78494.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373379.5 ENSP00000362477.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000373379.5Link to Ensembl Protein Viewer:ENSP00000362477.1Re-query CCDS DB by Nucleotide ID:ENST00000373379Re-query CCDS DB by Protein ID:ENSP00000362477
Original member Current member NCBI NM_001307944.1 NP_001294873.1 Accepted alive Link to Nucleotide Sequence:NM_001307944.1Link to Protein Sequence:NP_001294873.1Re-query CCDS DB by Nucleotide ID:NM_001307944Re-query CCDS DB by Protein ID:NP_001294873Link to BLAST:NP_001294873.1

Chromosomal Locations for CCDS 78494.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 75274255 75274640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 75293472 75293514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 75296342 75296411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 75297491 75297553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 75299735 75299896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 75300867 75300988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (846 nt):
ATGGCCACGGAGTTACAGTGTCCGGACTCCATGCCCTGTCACAACCAGCAAGTAAACTCTGCCTCAACCC
CAAGTCCCGAGCAGCTGCGACCTGGCGATCTGATCCTGGACCACGCAGGGGGAAACAGAGCCTCCAGGGC
CAAGGTGATTCTCCTCACGGGGTACGCCCATTCTAGCCTGCCGGCCGAGCTGGACTCTGGGGCCTGCGGC
GGCTCCAGCCTCAACTCAGAGGGCAACAGTGGTAGTGGTGACAGTAGCAGCTATGACGCACCAGCTGGCA
ACTCCTTCCTAGAGGACTGCGAACTCTCCCGGCAGATCGGGGCGCAGCTTAAGCTGCTGCCTATGAATGA
TCAGATACGGGAGCTACAGACCATCATCCGTGACAAGACAGCCAGTAGAGGTGACTTCATGTTTTCTGCG
GATCGTTTGATCAGACTTGTTGTGGAAGAGGGATTGAATCAGCTGCCATATAAAGAATGCATGGTGACCA
CTCCAACAGGGTACAAGTATGAAGGAGTGAAATTTGAGAAGGGAAATTGTGGGGTCAGCATAATGAGAAG
CGGTGAGGCAATGGAACAAGGTTTACGAGACTGCTGTCGATCCATACGAATTGGAAAGATCCTGATTCAG
AGTGATGAGGAGACACAAAGAGCCAAAGTATATTATGCCAAATTCCCCCCAGACATTTACCGGAGAAAAG
TCCTTCTGATGTATCCAATTCTCAGCACTGGAAATACTGTAATTGAAGCTGTAAAGGTTCTTATAGAACA
TGGAGTTCAACCCAGTGTTATCATCCTACTCAGTCTGTTCTCCACTCCTCATGGTGAGTTCAGCATGAGG
CAGTAA

Translation (281 aa):
MATELQCPDSMPCHNQQVNSASTPSPEQLRPGDLILDHAGGNRASRAKVILLTGYAHSSLPAELDSGACG
GSSLNSEGNSGSGDSSSYDAPAGNSFLEDCELSRQIGAQLKLLPMNDQIRELQTIIRDKTASRGDFMFSA
DRLIRLVVEEGLNQLPYKECMVTTPTGYKYEGVKFEKGNCGVSIMRSGEAMEQGLRDCCRSIRIGKILIQ
SDEETQRAKVYYAKFPPDIYRRKVLLMYPILSTGNTVIEAVKVLIEHGVQPSVIILLSLFSTPHGEFSMR
Q


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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