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Report for CCDS7941.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7941.1 Public Homo sapiens 11 NDUFS3 24 110 108 CCDS HistoryNCBI Gene:4722Re-query CCDS DB by CCDS ID:7941.1Re-query CCDS DB by GeneID:4722See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7941.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263774.9 ENSP00000263774.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000263774.9Link to Ensembl Protein Viewer:ENSP00000263774.4Re-query CCDS DB by Nucleotide ID:ENST00000263774Re-query CCDS DB by Protein ID:ENSP00000263774
Original member Current member NCBI NM_004551.3 NP_004542.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004551.3Link to Protein Sequence:NP_004542.1Re-query CCDS DB by Nucleotide ID:NM_004551Re-query CCDS DB by Protein ID:NP_004542Link to BLAST:NP_004542.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004542.1 264 O75489-1 264 100% 0 0

Chromosomal Locations for CCDS 7941.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 47579092 47579158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47579269 47579334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47580525 47580622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47580835 47580984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47582088 47582213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47582349 47582468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47584314 47584481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (795 nt):
ATGGCGGCGGCGGCGGTAGCCAGGCTGTGGTGGCGCGGGATCTTGGGGGCCTCGGCGCTGACCAGGGGGA
CTGGGCGACCCTCCGTTCTGTTGCTGCCGGTGAGGCGGGAGAGCGCCGGGGCCGACACGCGCCCCACTGT
CAGACCACGGAATGATGTGGCCCACAAGCAGCTCTCAGCTTTTGGAGAGTATGTGGCTGAAATCTTGCCC
AAGTATGTCCAACAAGTTCAGGTGTCCTGCTTCAATGAGTTAGAGGTCTGTATCCATCCTGATGGCGTCA
TCCCAGTGCTGACTTTCCTCAGGGATCACACCAATGCACAGTTCAAATCTCTGGTTGACTTGACAGCAGT
GGACGTCCCAACTCGGCAAAACCGTTTTGAGATTGTCTACAACCTGTTGTCTCTGCGCTTCAACTCACGG
ATCCGTGTGAAGACCTACACAGATGAGCTGACGCCCATTGAGTCTGCTGTCTCTGTGTTCAAGGCAGCCA
ACTGGTATGAAAGGGAGATCTGGGACATGTTTGGAGTCTTCTTTGCTAACCACCCTGATCTAAGAAGGAT
CCTGACAGATTATGGCTTCGAGGGACATCCTTTCCGGAAAGACTTTCCTCTATCTGGCTATGTTGAGTTA
CGTTATGATGATGAAGTGAAGCGGGTGGTGGCAGAGCCGGTGGAGTTGGCCCAAGAGTTCCGCAAATTTG
ACCTGAACAGCCCCTGGGAGGCTTTCCCAGTCTATCGCCAACCCCCGGAGAGTCTCAAGCTTGAAGCCGG
AGACAAGAAGCCTGATGCCAAGTAG

Translation (264 aa):
MAAAAVARLWWRGILGASALTRGTGRPSVLLLPVRRESAGADTRPTVRPRNDVAHKQLSAFGEYVAEILP
KYVQQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNRFEIVYNLLSLRFNSR
IRVKTYTDELTPIESAVSVFKAANWYEREIWDMFGVFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVEL
RYDDEVKRVVAEPVELAQEFRKFDLNSPWEAFPVYRQPPESLKLEAGDKKPDAK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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