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Report for CCDS79708.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
79708.1 Public Mus musculus 19 Entpd1 23 108 98 CCDS HistoryNCBI Gene:12495Re-query CCDS DB by CCDS ID:79708.1Re-query CCDS DB by GeneID:12495See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 79708.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000134063.7 ENSMUSP00000116285.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000134063.7Link to Ensembl Protein Viewer:ENSMUSP00000116285.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000134063Re-query CCDS DB by Protein ID:ENSMUSP00000116285
Original member Current member NCBI NM_001304721.1 NP_001291650.1 Accepted alive Link to Nucleotide Sequence:NM_001304721.1Link to Protein Sequence:NP_001291650.1Re-query CCDS DB by Nucleotide ID:NM_001304721Re-query CCDS DB by Protein ID:NP_001291650Link to BLAST:NP_001291650.1

Chromosomal Locations for CCDS 79708.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 40612421 40612523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40711163 40711290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40720457 40720574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40723087 40723237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40724925 40725084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40726022 40726258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40727288 40727548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40733667 40733786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40736750 40736884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40738823 40739029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1620 nt):
ATGGCAGCTGGCAGAGGGTTGGCGCGCTTTACGGACCTGGAAGAATTGGATGAAGTCATCACTGAGAGGA
AGACCAAGAGGCACAAACTGAGATCTTACCAAGATTCTAAGGTGAAGAGATTTTGCTCCAAAAATATTCT
GATCATCCTTGGTTTCACCTCTATCTTGGCTGTGATAGCTTTGATTGCTGTGGGACTGACCCAGAACAAA
CCTTTGCCAGAAAATGTTAAGTATGGGATTGTGTTGGATGCGGGGTCATCTCACACCAACCTGTACATCT
ACAAGTGGCCGGCCGAGAAGGAGAATGACACAGGGGTGGTGCAGCAGTTAGAGGAATGCCAAGTGAAAGG
TCCTGGAATCTCAAAATATGCTCAGAAAACAGATGAAATCGGTGCGTACCTGGCCGAATGCATGGAACTG
TCCACCGAACTGATACCAACATCCAAGCATCACCAGACTCCTGTCTACCTGGGAGCCACAGCAGGCATGC
GCTTGCTTAGAATGGAAAGCGAACAATCGGCAGACGAGGTCCTGGCTGCAGTGTCAACAAGCCTTAAGAG
CTACCCCTTTGACTTCCAGGGTGCCAAGATCATCACTGGACAAGAGGAAGGTGCCTATGGGTGGATTACT
ATTAACTATCTGCTGGGCAGATTCACTCAGGAACAGAGTTGGCTAAGCCTCATCTCAGACAGTCAGAAAC
AGGAAACCTTTGGCGCTTTGGATCTCGGCGGAGCCTCCACACAGATCACCTTCGTGCCCCAAAACAGCAC
TATAGAGTCCCCAGAAAACTCTCTGCAATTCCGTCTCTATGGCGAGGACTATACTGTGTACACACACAGC
TTCCTGTGCTATGGGAAGGATCAGGCTCTCTGGCAGAAACTGGCCAAGGACATTCAGGTTTCAAGTGGTG
GCGTCCTTAAGGACCCATGCTTTAACCCAGGATACGAGAAGGTTGTGAATGTAAGTGAGCTCTATGGCAC
TCCCTGCACCAAAAGATTCGAAAAGAAGCTACCATTTGATCAGTTTCGAATCCAGGGCACTGGAGACTAC
GAACAGTGCCACCAGAGCATCCTTGAGCTCTTCAACAACAGCCACTGCCCTTACTCCCAGTGTGCCTTCA
ATGGCGTCTTCCTGCCACCTCTCCATGGGAGTTTTGGGGCGTTTTCTGCTTTCTACTTTGTGATGGATTT
TTTTAAGAAGGTAGCGAAAAACAGTGTCATCTCTCAGGAGAAAATGACCGAGATAACAAAAAATTTTTGC
TCAAAATCTTGGGAAGAGACAAAGACATCTTATCCTTCAGTAAAGGAGAAGTACCTGAGTGAGTACTGCT
TCTCGGGCGCCTACATCCTCTCTCTCCTGCAAGGCTATAACTTCACAGACAGCTCCTGGGAACAGATTCA
TTTTATGGGCAAGATCAAAGACAGCAACGCGGGGTGGACTTTGGGCTACATGCTGAACTTGACCAACATG
ATCCCAGCTGAACAGCCGTTGTCCCCGCCTCTCCCTCACTCCACCTACATCGGCCTCATGGTTCTCTTCT
CCCTGCTCTTGGTTGCTGTGGCCATCACAGGCCTGTTCATCTATAGCAAGCCTTCATATTTCTGGAAAGA
GGCAGTATAG

Translation (539 aa):
MAAGRGLARFTDLEELDEVITERKTKRHKLRSYQDSKVKRFCSKNILIILGFTSILAVIALIAVGLTQNK
PLPENVKYGIVLDAGSSHTNLYIYKWPAEKENDTGVVQQLEECQVKGPGISKYAQKTDEIGAYLAECMEL
STELIPTSKHHQTPVYLGATAGMRLLRMESEQSADEVLAAVSTSLKSYPFDFQGAKIITGQEEGAYGWIT
INYLLGRFTQEQSWLSLISDSQKQETFGALDLGGASTQITFVPQNSTIESPENSLQFRLYGEDYTVYTHS
FLCYGKDQALWQKLAKDIQVSSGGVLKDPCFNPGYEKVVNVSELYGTPCTKRFEKKLPFDQFRIQGTGDY
EQCHQSILELFNNSHCPYSQCAFNGVFLPPLHGSFGAFSAFYFVMDFFKKVAKNSVISQEKMTEITKNFC
SKSWEETKTSYPSVKEKYLSEYCFSGAYILSLLQGYNFTDSSWEQIHFMGKIKDSNAGWTLGYMLNLTNM
IPAEQPLSPPLPHSTYIGLMVLFSLLLVAVAITGLFIYSKPSYFWKEAV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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