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Report for CCDS79768.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
79768.1 Public Mus musculus 2 Dolpp1 23 108 98 CCDS HistoryNCBI Gene:57170Re-query CCDS DB by CCDS ID:79768.1Re-query CCDS DB by GeneID:57170See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 79768.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000113612.9 ENSMUSP00000109242.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113612.9Link to Ensembl Protein Viewer:ENSMUSP00000109242.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000113612Re-query CCDS DB by Protein ID:ENSMUSP00000109242
Original member NCBI NM_001290509.1 NP_001277438.1 Updated not alive Link to Nucleotide Sequence:NM_001290509.1Link to Protein Sequence:NP_001277438.1Re-query CCDS DB by Nucleotide ID:NM_001290509Re-query CCDS DB by Protein ID:NP_001277438
Current member NCBI NM_001290509.2 NP_001277438.1 Accepted alive Link to Nucleotide Sequence:NM_001290509.2Link to Protein Sequence:NP_001277438.1Re-query CCDS DB by Nucleotide ID:NM_001290509Re-query CCDS DB by Protein ID:NP_001277438Link to BLAST:NP_001277438.1

Chromosomal Locations for CCDS 79768.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 30392437 30392512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 30395659 30395759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 30395977 30396061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 30396153 30396252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 30396432 30396530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 30397468 30397557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 30399142 30399178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (588 nt):
ATGGCAGCGGACGGACAGTGCTCGCTCCCCGCTTCATGGCGGCCAGTGACCCTCACCCACGTCGAATACC
CTGCAGGTGATCTGTCTGGCCACCTCCTGGCCTACCTGAGCCTCAGCCCTATTTTTGTCGTTGTTGGTTT
TTTGACTCTCATCATATTCAAGCGGGAGCTACACACGATTTCATTCCTTGGGGGACTGGCACTGAATCAG
GGCGTCAACTGGCTGATCAAACACGTCATCCAGGAGCCTCGGCCCTGTGGAGGCCCACATACAGCAGTGG
GCACTAAGTACGGGATGCCCTCCAGCCATTCCCAGTTCATGTGGTTCTTCTCCGTCTACTCCTTCCTCTT
CCTGTATTTAAGAATGCACCAAACAAATAACGCCAGGTTCTTGGACTTGCTGTGGAGGCACGTGCTGTCT
CTAGGGCTCCTCACCGCGGCCTTTCTCGTCTCCTATAGCAGGCCCATCTCCGAGTTTTTCCTCATCCGGG
ACACGAGCCTCATTCCCAATGTGCTCTGGTTTGAGTACACAGTAACCAGGGCAGAAGCCAGGAACAGACA
GCGCAAACTTGGAACAAAACTGCAGTGA

Translation (195 aa):
MAADGQCSLPASWRPVTLTHVEYPAGDLSGHLLAYLSLSPIFVVVGFLTLIIFKRELHTISFLGGLALNQ
GVNWLIKHVIQEPRPCGGPHTAVGTKYGMPSSHSQFMWFFSVYSFLFLYLRMHQTNNARFLDLLWRHVLS
LGLLTAAFLVSYSRPISEFFLIRDTSLIPNVLWFEYTVTRAEARNRQRKLGTKLQ


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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