NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS80794.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
80794.1 Public Mus musculus 7 Coq7 23 108 98 CCDS HistoryNCBI Gene:12850Re-query CCDS DB by CCDS ID:80794.1Re-query CCDS DB by GeneID:12850See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 80794.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098090.9 ENSMUSP00000095695.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098090.9Link to Ensembl Protein Viewer:ENSMUSP00000095695.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000098090Re-query CCDS DB by Protein ID:ENSMUSP00000095695
Original member NCBI NM_001304758.1 NP_001291687.1 Updated not alive Link to Nucleotide Sequence:NM_001304758.1Link to Protein Sequence:NP_001291687.1Re-query CCDS DB by Nucleotide ID:NM_001304758Re-query CCDS DB by Protein ID:NP_001291687
Current member NCBI NM_001304758.2 NP_001291687.1 Accepted alive Link to Nucleotide Sequence:NM_001304758.2Link to Protein Sequence:NP_001291687.1Re-query CCDS DB by Nucleotide ID:NM_001304758Re-query CCDS DB by Protein ID:NP_001291687Link to BLAST:NP_001291687.1

Chromosomal Locations for CCDS 80794.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 118509810 118510180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 118517334 118517400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 118525824 118525892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 118527337 118527476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 118528304 118528418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 118529559 118529737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 118533179 118533251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1014 nt):
ATGAGCGCCGCCGGAGCCATAGCGGCTGCTTCCGTGGGACGCCTGCGCACTGGTGTCCGGAGGCCCTTCT
CAGAGTATGGAAGAGGCCTCATCATCAGGTGTCACAGTTCGGGGATGACCTTAGACAATATTAACCGGGC
AGCCGTGGATCGAATAATTCGGGTGGATCACGCTGGTGAATATGGAGCAAACCGCATCTATGCAGGGCAA
ATGGCCGTGCTCGGTCGGACCAGTGTTGGCCCTGTCATTCAGAAAATGTGGGATCAAGAGAAGAACCATT
TGAAAAAGTTCAACGAGTTGATGATTGCATTCAGGGTCCGACCTACGGTTTTGATGCCCTTGTGGAACGT
GGCAGGCTTTGCCCTGGGGGCAGGAACTGCCTTGCTGGGGAAGGAAGGAGCAATGGCCTGCACCGTGGCG
GTAGAAGAGTCTATCGCTAATCACTACAACAACCAGATCCGCATGCTGATGGAAGAGGACCCTGAGAAGT
ATGAGGAGCTGCTGCAGGTCATCAAGCAGTTTCGCGATGAGGAGCTTGAACACCACGATACAGGCCTGGA
CCATGACGCAGAGCTGCCCTTTCAGTGCCTCAACAGCTGGAAACACATTCCAAGCTATATGTCTTCACCG
GGCAGGGACAATGATCATGAAAAAAAAAGTCATCAAAACACAAAGTGGAGAACCTGGGAAACAGCAATGT
GCAGGGTGATGAGGGAGGCGTGGGTTCAAATCCCAGCTTTACCACTGCAGGCTATAGGATCCCAGGCAGT
GAACATAGCCTGCCTGGGCCTCAGTGTTCCCACCTGCAAAGTAGAGATGAAGACAGAAGCTGCTTTGAAG
ATTGTTCTGCATGGGAGGGATGAACAAGCCCCACATCGTGAGGGACCGAGGACTGCCACTGAAGAACTGT
TCTGGCTGGCTTCCATCTCTCTCCACAATGCTGCCAACAGACAGGGAAGAGGGGTCTTATATCTGGCATG
CTCGCTTTGCAAACTTTGTGCACAATGGCTTTGA

Translation (337 aa):
MSAAGAIAAASVGRLRTGVRRPFSEYGRGLIIRCHSSGMTLDNINRAAVDRIIRVDHAGEYGANRIYAGQ
MAVLGRTSVGPVIQKMWDQEKNHLKKFNELMIAFRVRPTVLMPLWNVAGFALGAGTALLGKEGAMACTVA
VEESIANHYNNQIRMLMEEDPEKYEELLQVIKQFRDEELEHHDTGLDHDAELPFQCLNSWKHIPSYMSSP
GRDNDHEKKSHQNTKWRTWETAMCRVMREAWVQIPALPLQAIGSQAVNIACLGLSVPTCKVEMKTEAALK
IVLHGRDEQAPHREGPRTATEELFWLASISLHNAANRQGRGVLYLACSLCKLCAQWL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH