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Report for CCDS80902.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
80902.1 Public Mus musculus 8 Inpp4b 23 108 98 CCDS HistoryNCBI Gene:234515Re-query CCDS DB by CCDS ID:80902.1Re-query CCDS DB by GeneID:234515See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 80902.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000172031.8 ENSMUSP00000131324.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000172031.8Link to Ensembl Protein Viewer:ENSMUSP00000131324.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000172031Re-query CCDS DB by Protein ID:ENSMUSP00000131324
Original member Current member EBI ENSMUST00000215332.1 ENSMUSP00000148972.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000215332.1Link to Ensembl Protein Viewer:ENSMUSP00000148972.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000215332Re-query CCDS DB by Protein ID:ENSMUSP00000148972
Original member Current member NCBI NM_001297596.1 NP_001284525.1 Accepted alive Link to Nucleotide Sequence:NM_001297596.1Link to Protein Sequence:NP_001284525.1Re-query CCDS DB by Nucleotide ID:NM_001297596Re-query CCDS DB by Protein ID:NP_001284525Link to BLAST:NP_001284525.1

Chromosomal Locations for CCDS 80902.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 81741410 81741500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81743770 81743814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81768094 81768212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81770808 81770924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81844456 81844506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81856692 81856771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81884133 81884244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81890711 81890783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81902726 81902873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81952179 81952309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81952688 81952792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81969511 81969619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81985237 81985414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81997200 81997403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 82010539 82010704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 82033057 82033229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 82034381 82034504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 82041890 82042007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 82046223 82046363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 82048460 82048557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 82068932 82069044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 82071681 82071835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 82122603 82122735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2784 nt):
ATGGAAATCAAAGAGGAAGGAACATCAGAAGAAGGCCAGCATTTTCTTCCTGCAGCTCAGGCAAATGACC
CTGAGGACATTCAGTTTACCAGCATCCAGAAGATTCCGAACGAGCCACAGTTGGAATTCATTCTCGCCTG
CAGGGATCTTGTGGCTCCTGTCAGTGATCGGAAACTGAATACAGTAGTCCAGATCTCAGTAATCCACCCG
GTGGAGCAGACCCTGACGAGGTACTCCAGCACAGAAATTGTGGAGGGAACAAAAGACCCACTGTTCCTAA
CGGGTGTCACATTCCCACCGGACTACCCCATCTATGAAGAGACAAGAATAAAACTGACAGTCTACGATGT
CAAGGATAAGTCTCATGATACTATTCGAACCAGTGTCCTTCCGGAACACAAGGATCCCCTGCCAGAAGTT
GCGAGAAGCTTCCTGGGCTGTGCCAGTTTTAAAGTTGGGGAGCTGCTGAAGTCCAAGGAGCAGCTGCTGT
CCCTGAGCCTGAGAACCTCAGATGGTGGCAAAGTGGTCGGCACCATAGAAGTCAGCCTCGTGAAGATGGG
AGAGATTGAGGATGGGGACACCGACCACATCACAACAGATGTGCAGGGACAAAAGTGTGCACTAATGTAT
GAATCCACAGCACCAGAAAGTCTGAGCGGGAAGGAAAACTTACCTTTTATGAATGCAGTCTTAAGGAATC
CTGTGTGTAAGCTGTATAGATTCCCCACATCTGACAATAAGTGGATGCGAATCCGTGAGCAGATGTCAGA
AAGCATCCTTTCTTTTCATATTCCTAAGGAATTGATTTCCCTTCACATAAAAGAAGACTTATGTAGAAAC
CAGGAGTTAAAAGAACTTGGTGACCTTTCCCCACACTGGGACAACCTACGGAAAAATGTCCTTTCTCACT
GTGATCAAATGGTGACTATGTACCAAGACATTCTGACAGAACTTTCCAAAGAAACAGGGTCCTCTTTCAA
ATCCAGCAGCAGCAAAGGAGAGAAAACATTAGAATTTGTTCCAGTAAATCTACACTTGCAACGGATGCAG
GTGCACAGCCCTCACCTGAAAGATGCTCTCTATGATGTCATCACTGTGGGGGCCCCAGCTGCCCATTTTC
AGGGATTCAAGAACGGTGGTCTTCGTAAACTCCTCCATAGGTTTGAGACAGAGAGAAGGAACACCGGCTA
CCAGTTTATTTACTATTCACCTGAGAACACAGCGAAGGCAAAGGAAGTTCTCAGCAGCATCAATCAGCTA
CAACCTCTCATAGCAACTCATGCAGACCTGCTGCTAACCTCTGCCAGCCAGCGTTCTCCAGACAGCCTGA
AGAGCTCTTTAAAGCTGCTTTCAGAAAAAACTGAGCTTTTTGTCCATGCCTTCAAGGACCAGCTGGTCAG
GAGTGCTCTTTTAGCTCTCTACACTGCAAGGCCAGGAGGCATCCTTAAGAAGCCACCCTCTCCTAATGTC
AGCACAGAGGAGAAAAGTACTCAGCATGATACCCCACAGCTTAGAAGACAAGACTCCATACCACATCATT
CTGACTATGATGAAGAAGAGTGGGATAGGGTGTGGGCCAACGTGGGGAAGAGCCTGAACTGCATTATCGC
TAAAGTAGACAAACTGATCGAGAGAGACAGTCACAACGAAGAAGGTGCTGGAGGCAGCAGTAGCAAGGAT
GGAGAGGCAGACCATACCCTGGAAGATTCCATCACATCTCACCCACGTGAGGACTGGTATGAACAGCTGC
ACCCACTCATCCTTACCTTGAAGGAGTGCATGGGAGAAGTGGTGAACCGAGCAAAGCAATCCCTGACATT
TGTACTGCTTCAGGAACTGGCCTACAGTCTGCCCCAGTGTTTGATGCTGACTCTGAGAAGAGACATTGTC
TTCAGTCAGGCGCTTGCTGGATTGGTTTGTGGTTTTATCATCAAATTACATACAAGTTTGCATGACCCTG
GCTTCCTACAGCAGCTTCATACAGTGGGCTTGATAGTACAATACGAAGGACTGCTAAGTACTTACAGTGA
TGAAATTGGAATGCTGGAGGACATGGCAGTCGGCATTTCAGATTTGAGGAAAGTTGCATTTAAAATAACT
GAAGCCACGTCCAATGATGTCCTTCCTGTTCTCACGGGGAGACGGGAACACTATGTGGTGGAGGTCAAGC
TTCCAGCTACAGTATTTGAGTCGCTCCCACTGCAGATTAAAGAAGGCCAGTTGCTTCATGTGTATCCCGT
TCTGTTTAATGTCGGAATCAATGAGCAGCAGACTCTGGCTGAGAGGTTTGGAGATGTTTCTTTGCAAGAA
AGTATTAATCAAGAAAATTTTGAACTTGTACAAGAATATTATTCAATATTTATGGAAAAGATGCCTCCTG
ATTATATTTCACATTTTCAAGAACAAACTGATTTAAAAGGACTGTTGGACAATCTCCACCAAAATATTCA
AGCCAAAAAAAGAAAGAATGTAGAAATCATGTGGCTGGCAGCAACGATTTGTCGGAAACTCAATGGCATT
CGTTTTACCTGCTGTAAAAGTGCCAAAGACAGGACATCGATGTCGGTGACACTGGAACAGTGCTCCATCC
TGAGAGACGAGCATCAACTGCACAAAGACTTTTTCATCAGAGCTTTAGATTGCATGAGAAGAGAAGGATG
CCGCATAGAGAATGTACTGAAGAATATCAAATGCAGGAGGTATGCTTTCAACATGCTACAGCTGATGGCT
TTCCCCAAGTGCTACAGACCTCCAGAAGGCACTTATGGAAAAGCTGACACCTAA

Translation (927 aa):
MEIKEEGTSEEGQHFLPAAQANDPEDIQFTSIQKIPNEPQLEFILACRDLVAPVSDRKLNTVVQISVIHP
VEQTLTRYSSTEIVEGTKDPLFLTGVTFPPDYPIYEETRIKLTVYDVKDKSHDTIRTSVLPEHKDPLPEV
ARSFLGCASFKVGELLKSKEQLLSLSLRTSDGGKVVGTIEVSLVKMGEIEDGDTDHITTDVQGQKCALMY
ESTAPESLSGKENLPFMNAVLRNPVCKLYRFPTSDNKWMRIREQMSESILSFHIPKELISLHIKEDLCRN
QELKELGDLSPHWDNLRKNVLSHCDQMVTMYQDILTELSKETGSSFKSSSSKGEKTLEFVPVNLHLQRMQ
VHSPHLKDALYDVITVGAPAAHFQGFKNGGLRKLLHRFETERRNTGYQFIYYSPENTAKAKEVLSSINQL
QPLIATHADLLLTSASQRSPDSLKSSLKLLSEKTELFVHAFKDQLVRSALLALYTARPGGILKKPPSPNV
STEEKSTQHDTPQLRRQDSIPHHSDYDEEEWDRVWANVGKSLNCIIAKVDKLIERDSHNEEGAGGSSSKD
GEADHTLEDSITSHPREDWYEQLHPLILTLKECMGEVVNRAKQSLTFVLLQELAYSLPQCLMLTLRRDIV
FSQALAGLVCGFIIKLHTSLHDPGFLQQLHTVGLIVQYEGLLSTYSDEIGMLEDMAVGISDLRKVAFKIT
EATSNDVLPVLTGRREHYVVEVKLPATVFESLPLQIKEGQLLHVYPVLFNVGINEQQTLAERFGDVSLQE
SINQENFELVQEYYSIFMEKMPPDYISHFQEQTDLKGLLDNLHQNIQAKKRKNVEIMWLAATICRKLNGI
RFTCCKSAKDRTSMSVTLEQCSILRDEHQLHKDFFIRALDCMRREGCRIENVLKNIKCRRYAFNMLQLMA
FPKCYRPPEGTYGKADT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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