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Report for CCDS81026.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81026.1 Public Mus musculus 9 Car12 23 108 98 CCDS HistoryNCBI Gene:76459Re-query CCDS DB by CCDS ID:81026.1Re-query CCDS DB by GeneID:76459See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81026.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000085420.11 ENSMUSP00000082541.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000085420.11Link to Ensembl Protein Viewer:ENSMUSP00000082541.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000085420Re-query CCDS DB by Protein ID:ENSMUSP00000082541
Original member Current member NCBI NM_001306148.1 NP_001293077.1 Accepted alive Link to Nucleotide Sequence:NM_001306148.1Link to Protein Sequence:NP_001293077.1Re-query CCDS DB by Nucleotide ID:NM_001306148Re-query CCDS DB by Protein ID:NP_001293077Link to BLAST:NP_001293077.1

Chromosomal Locations for CCDS 81026.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 66713849 66713933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 66717560 66717580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 66746470 66746649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 66747576 66747721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 66750930 66751025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 66751943 66752006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 66752287 66752444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 66753695 66753821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 66763247 66763334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 66764288 66764357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1035 nt):
ATGCCTCACCGCAGCCTGCGCGCGACTGTCGTCCTCCTGTTGGTGATCCTTAAGAAGCAGCCTTCCAGCT
CAGCCCCACTCAACGGATCCAAGTGGACCTATGTTGGTCCTGCTGGGGAAAAGAACTGGTCCAAGAAGTA
CCCATCGTGTGGAGGCCTCCTGCAGTCCCCGATAGACCTACATAGCGACATCCTTCAGTATGATGCTAGC
CTCGCACCCCTCCAGTTCCAAGGTTACAATGTGTCTGTTGAAAAGCTGTTGAACCTGACCAATGATGGCC
ATTCAGTGAGACTGAATCTGAACTCAGACATGTACATCCAGGGTCTCCAGCCTCACCACTACAGAGCAGA
GCAGCTGCACTTGCACTGGGGGAACCGCAATGACCCCCATGGCTCTGAACACACCGTGAGTGGGAAGCAC
TTTGCTGCCGAGCTGCACATTGTCCATTATAACTCAGACCTGTACCCTGACTTCAGCACCGCCAGTGACA
AGTCCGAAGGCCTCGCTGTCCTTGCTGTTCTTATTGAGATAGGCTCCGCCAATCCATCATATGACAAGAT
CTTCAGCCATCTTCAACATGTTAAGTATAAAGGCCAACAAGTGCTCATCCCAGGCTTCAACATTGAAGAA
CTTCTGCCCGAGAGCCCTGGCGAGTATTACCGCTATGAAGGGTCCCTGACTACACCTCCTTGCTACCCTA
CCGTGCTCTGGACAGTTTTCCGAAACCCTGTGCAGATTTCCCAGGAGCAGCTGCTGGCTTTGGAGACAGC
TCTGTACTTCACACACATGGATGATCCTACCCCCAGAGAAATGATCAACAACTTCCGGCAGGTCCAGAAG
TTCGATGAGAGGCTGGTGTATATCTCCTTCCGACAAGGTATCATCCTTTCAGTGGCCCTGGCTGGCGTTC
TTGGCATCTCCATTGTTCTGGCAGTGTCTATTTGGCTCTTCAAAAGGAAGAAGAGCAAAAAAGGTGACAA
CAAGGGAGTCATTTATAAACCAGCCATCAAGAAGGAGGCTGAGGTCCACGCCTGA

Translation (344 aa):
MPHRSLRATVVLLLVILKKQPSSSAPLNGSKWTYVGPAGEKNWSKKYPSCGGLLQSPIDLHSDILQYDAS
LAPLQFQGYNVSVEKLLNLTNDGHSVRLNLNSDMYIQGLQPHHYRAEQLHLHWGNRNDPHGSEHTVSGKH
FAAELHIVHYNSDLYPDFSTASDKSEGLAVLAVLIEIGSANPSYDKIFSHLQHVKYKGQQVLIPGFNIEE
LLPESPGEYYRYEGSLTTPPCYPTVLWTVFRNPVQISQEQLLALETALYFTHMDDPTPREMINNFRQVQK
FDERLVYISFRQGIILSVALAGVLGISIVLAVSIWLFKRKKSKKGDNKGVIYKPAIKKEAEVHA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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