NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS81063.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81063.1 Public Mus musculus 9 Pccb 23 108 98 CCDS HistoryNCBI Gene:66904Re-query CCDS DB by CCDS ID:81063.1Re-query CCDS DB by GeneID:66904See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81063.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000149322.7 ENSMUSP00000118006.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000149322.7Link to Ensembl Protein Viewer:ENSMUSP00000118006.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000149322Re-query CCDS DB by Protein ID:ENSMUSP00000118006
Original member Current member NCBI NM_001311149.1 NP_001298078.1 Accepted alive Link to Nucleotide Sequence:NM_001311149.1Link to Protein Sequence:NP_001298078.1Re-query CCDS DB by Nucleotide ID:NM_001311149Re-query CCDS DB by Protein ID:NP_001298078Link to BLAST:NP_001298078.1

Chromosomal Locations for CCDS 81063.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 100982685 100982806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 100984373 100984472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 100985128 100985226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 100985531 100985631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 100985779 100985886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 100987781 100987904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 100994568 100994649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 100995560 100995680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 100999165 100999273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 101023136 101023249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 101027080 101027136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 101030175 101030243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 101031856 101031975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 101034669 101034857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1515 nt):
ATGGCGGCGGCGATTAGGATTCGGGCGGTGGCGGCTGGAGCGAGGCTCAGCGTTCTGAATTGCGGCCTCG
GCATCACGACCCGCGGCCTTTGCAGCCAGCCGGTTTCAGTTAAAGAGCGCATCGACAACAAGCGCCATGC
AGCGTTGCTGGGAGGAGGCCAGCGCCGCATCGACGCGCAGCACAAGCGAGGGAAGCTAACAGCCAGGGAG
CGGATCAGTCTTCTGCTGGATCCTGGCAGCTTCATGGAGAGCGACATGTTTGTGGAACACAGATGTGCCG
ACTTCGGAATGGCTGCTGATAAGAATAAGTTTCCCGGAGATAGTGTGGTCACTGGACGGGGCCGAATCAA
TGGACGATTGGTTTATGTCTTCAGTCAGGATTTTACAGTTTTTGGAGGCAGTCTGTCAGGAGCACATGCT
CAAAAGATCTGCAAAATCATGGACCAGGCCATAACAGTGGGGGCTCCAGTGATCGGGCTCAATGACTCCG
GGGGCGCCAGAATCCAGGAGGGGGTGGAGTCCTTGGCTGGCTACGCGGACATCTTCCTGGACACATCTTA
CCTGTTTATCACTGGCCCTGAAGTTGTGAAGTCTGTTACCAATGAGGATGTCACTCAAGAGCAGCTGGGT
GGTGCCAAGACCCACACCACTGTGTCAGGTGTGGCCCATAGAGCTTTCGACAATGATGTTGATGCTCTGT
GTAACCTGCGTGAATTCTTCAATTTCCTGCCCCTCAGCAGCCAGGACCCGGCTCCCATCCGAGAGTGCCA
TGACCCCAGTGACCGTCTGGTTCCTGAGCTGGACACAGTTGTCCCTTTGGAGTCAAGCAAAGCCTACAAC
ATGCTGGACATCATCCACGCAGTGATTGACGAGAGAGAGTTTTTTGAGATAATGCCCAGTTACGCAAAAA
ATATTGTCGTTGGCTTCGCAAGAATGAATGGGAGGACCGTTGGAATTGTCGGCAACCAGCCCAATGTGGC
CTCAGGGTGCTTGGACATTAATTCATCCGTGAAGGGGGCTCGTTTTGTCAGATTCTGTGACGCATTCAAC
ATTCCCCTCATCACTTTCGTTGACGTCCCTGGCTTCCTGCCTGGCACGGCGCAGGAGTATGGGGGCATCA
TCAGGCATGGTGCCAAGCTGCTCTACGCGTTCGCCGAGGCAACTGTGCCCAAAATCACAGTCATCACCAG
GAAGGCCTATGGAGGTGCCTATGATGTCATGAGCTCCAAACACCTTCTTGGTGACACCAACTATGCCTGG
CCCACAGCTGAGATTGCGGTCATGGGAGCAAAGGGTGCTGTGGAGATCATCTTCAAAGGACACCAAGATG
TGGAAGCCGCCCAGGCAGAGTATGTGGAGAAGTTCGCCAACCCTTTCCCAGCAGCCGTGAGAGGGTTTGT
GGATGACATCATCCAGCCATCCTCTACTCGTGCTCGGATATGCTGTGACCTGGAAGTCCTGGCCAGCAAG
AAGGTCCATCGTCCCTGGAGGAAACATGCAAATATCCCACTGTGA

Translation (504 aa):
MAAAIRIRAVAAGARLSVLNCGLGITTRGLCSQPVSVKERIDNKRHAALLGGGQRRIDAQHKRGKLTARE
RISLLLDPGSFMESDMFVEHRCADFGMAADKNKFPGDSVVTGRGRINGRLVYVFSQDFTVFGGSLSGAHA
QKICKIMDQAITVGAPVIGLNDSGGARIQEGVESLAGYADIFLDTSYLFITGPEVVKSVTNEDVTQEQLG
GAKTHTTVSGVAHRAFDNDVDALCNLREFFNFLPLSSQDPAPIRECHDPSDRLVPELDTVVPLESSKAYN
MLDIIHAVIDEREFFEIMPSYAKNIVVGFARMNGRTVGIVGNQPNVASGCLDINSSVKGARFVRFCDAFN
IPLITFVDVPGFLPGTAQEYGGIIRHGAKLLYAFAEATVPKITVITRKAYGGAYDVMSSKHLLGDTNYAW
PTAEIAVMGAKGAVEIIFKGHQDVEAAQAEYVEKFANPFPAAVRGFVDDIIQPSSTRARICCDLEVLASK
KVHRPWRKHANIPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH