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Report for CCDS8585.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8585.1 Public Homo sapiens 12 SLC2A14 24 110 108 CCDS HistoryNCBI Gene:144195Re-query CCDS DB by CCDS ID:8585.1Re-query CCDS DB by GeneID:144195See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8585.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396589.6 ENSP00000379834.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396589.6Link to Ensembl Protein Viewer:ENSP00000379834.2Re-query CCDS DB by Nucleotide ID:ENST00000396589Re-query CCDS DB by Protein ID:ENSP00000379834
Original member Current member EBI ENST00000543909.5 ENSP00000440480.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000543909.5Link to Ensembl Protein Viewer:ENSP00000440480.1Re-query CCDS DB by Nucleotide ID:ENST00000543909Re-query CCDS DB by Protein ID:ENSP00000440480
Original member Current member EBI ENST00000616981.4 ENSP00000482927.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000616981.4Link to Ensembl Protein Viewer:ENSP00000482927.1Re-query CCDS DB by Nucleotide ID:ENST00000616981Re-query CCDS DB by Protein ID:ENSP00000482927
Original member Current member NCBI NM_001286233.2 NP_001273162.1 Accepted alive Link to Nucleotide Sequence:NM_001286233.2Link to Protein Sequence:NP_001273162.1Re-query CCDS DB by Nucleotide ID:NM_001286233Re-query CCDS DB by Protein ID:NP_001273162Link to BLAST:NP_001273162.1
Original member Current member NCBI NM_153449.4 NP_703150.1 Accepted alive Link to Nucleotide Sequence:NM_153449.4Link to Protein Sequence:NP_703150.1Re-query CCDS DB by Nucleotide ID:NM_153449Re-query CCDS DB by Protein ID:NP_703150Link to BLAST:NP_703150.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273162.1 520 Q8TDB8-1 520 100% 0 0
NP_703150.1 520 Q8TDB8-1 520 100% 0 0

Chromosomal Locations for CCDS 8585.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 7814316 7814534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 7817831 7818034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 7819482 7819583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 7821221 7821325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 7827495 7827682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 7828704 7828866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 7829766 7830006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 7831604 7831764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 7832722 7832814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 7863369 7863455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1563 nt):
ATGGAGTTTCACAATGGTGGCCATGTGTCTGGAATTGGTGGGTTCTTGGTCTCACTGACTTCAAGAATGA
AGCCGCACACCCTCGCAGTCACCCCAGCTCTGATCTTTGCCATCACAGTTGCTACAATCGGCTCTTTCCA
GTTTGGCTACAACACTGGGGTCATCAATGCTCCTGAGACGATCATAAAGGAATTTATCAATAAAACTTTG
ACGGACAAGGCAAATGCCCCTCCCTCTGAGGTGCTGCTCACGAATCTCTGGTCCTTGTCTGTGGCCATAT
TTTCCGTCGGGGGTATGATCGGCTCCTTTTCCGTCGGACTCTTTGTTAACCGCTTTGGCAGGCGCAATTC
AATGCTGATTGTCAACCTGTTGGCTGCCACTGGTGGCTGCCTTATGGGACTGTGTAAAATAGCTGAGTCA
GTTGAAATGCTGATCCTGGGCCGCTTGGTTATTGGCCTCTTCTGCGGACTCTGCACAGGTTTTGTGCCCA
TGTACATTGGAGAGATCTCGCCTACTGCCCTGAGGGGTGCCTTTGGCACTCTCAACCAGCTGGGCATAGT
TATTGGAATTCTGGTGGCCCAGATCTTTGGTCTGGAACTCATCCTTGGGTCTGAAGAGCTATGGCCGGTG
CTATTAGGCTTTACCATCCTTCCAGCTATCCTGCAAAGTGCAGCCCTTCCATGTTGCCCTGAAAGTCCCA
GATTTTTGCTCATTAACAGAAAAAAAGAGGAGAATGCTACGCGGATCCTCCAGCGGTTGTGGGGCACCCA
GGATGTATCCCAAGACATCCAGGAGATGAAAGATGAGAGTGCAAGGATGTCACAAGAAAAGCAAGTCACC
GTGCTGGAGCTCTTTAGAGTGTCCAGCTACCGACAGCCCATCATCATTTCCATTGTGCTCCAGCTCTCTC
AGCAGCTCTCTGGGATCAATGCTGTGTTCTATTACTCAACAGGAATCTTCAAGGATGCAGGTGTTCAACA
GCCCATCTATGCCACCATCAGCGCGGGTGTGGTTAATACTATCTTCACTTTACTTTCTCTATTTCTGGTG
GAAAGGGCAGGAAGAAGGACTCTGCATATGATAGGCCTTGGAGGGATGGCTTTTTGTTCCACGCTCATGA
CTGTTTCTTTGTTATTAAAGAATCACTATAATGGGATGAGCTTTGTCTGTATTGGGGCTATCTTGGTCTT
TGTGGCCTGTTTTGAAATTGGACCAGGCCCCATTCCCTGGTTTATTGTGGCCGAACTCTTCAGCCAGGGC
CCCCGCCCAGCTGCGATGGCAGTGGCCGGCTGCTCCAACTGGACCTCCAACTTCCTAGTCGGATTGCTCT
TCCCCTCTGCTGCTTACTATTTAGGAGCCTACGTTTTTATTATCTTCACCGGCTTCCTCATTACCTTCTT
GGCCTTTACCTTCTTCAAAGTCCCTGAGACCCGTGGCAGGACTTTTGAGGATATCACACGGGCCTTTGAA
GGGCAGGCACACGGTGCAGATAGATCTGGGAAGGACGGCGTCATGGGGATGAACAGCATCGAGCCTGCTA
AGGAGACCACCACCAATGTCTAA

Translation (520 aa):
MEFHNGGHVSGIGGFLVSLTSRMKPHTLAVTPALIFAITVATIGSFQFGYNTGVINAPETIIKEFINKTL
TDKANAPPSEVLLTNLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLIVNLLAATGGCLMGLCKIAES
VEMLILGRLVIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVIGILVAQIFGLELILGSEELWPV
LLGFTILPAILQSAALPCCPESPRFLLINRKKEENATRILQRLWGTQDVSQDIQEMKDESARMSQEKQVT
VLELFRVSSYRQPIIISIVLQLSQQLSGINAVFYYSTGIFKDAGVQQPIYATISAGVVNTIFTLLSLFLV
ERAGRRTLHMIGLGGMAFCSTLMTVSLLLKNHYNGMSFVCIGAILVFVACFEIGPGPIPWFIVAELFSQG
PRPAAMAVAGCSNWTSNFLVGLLFPSAAYYLGAYVFIIFTGFLITFLAFTFFKVPETRGRTFEDITRAFE
GQAHGADRSGKDGVMGMNSIEPAKETTTNV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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