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Report for CCDS9057.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9057.1 Public Homo sapiens 12 AMDHD1 24 110 108 CCDS HistoryNCBI Gene:144193Re-query CCDS DB by CCDS ID:9057.1Re-query CCDS DB by GeneID:144193See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9057.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000266736.7 ENSP00000266736.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000266736.7Link to Ensembl Protein Viewer:ENSP00000266736.2Re-query CCDS DB by Nucleotide ID:ENST00000266736Re-query CCDS DB by Protein ID:ENSP00000266736
Original member Current member NCBI NM_152435.3 NP_689648.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152435.3Link to Protein Sequence:NP_689648.2Re-query CCDS DB by Nucleotide ID:NM_152435Re-query CCDS DB by Protein ID:NP_689648Link to BLAST:NP_689648.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689648.2 426 Q96NU7 426 100% 0 0

Chromosomal Locations for CCDS 9057.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 95943399 95943535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 95952717 95952823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 95954911 95954975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 95956685 95956962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 95960398 95960623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 95962355 95962479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 95965686 95965779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 95966348 95966508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 95967756 95967843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1281 nt):
ATGGCAAGCGGCCACAGCCTCCTGCTGGAGAACGCGCAGCAAGTGGTGCTGGTGTGCGCCCGCGGCGAGC
GCTTCCTGGCGCGGGATGCGCTGCGCAGCCTGGCGGTGCTGGAAGGCGCCAGCCTGGTGGTGGGCAAAGA
TGGATTTATAAAAGCTATTGGTCCTGCTGATGTTATTCAAAGACAGTTTTCTGGAGAAACTTTTGAAGAA
ATAATTGACTGCTCTGGGAAATGTATTCTACCAGGTTTGGTGGATGCACACACACATCCAGTATGGGCTG
GTGAAAGAGTTCACGAATTTGCAATGAAGTTGGCAGGAGCCACCTACATGGAAATTCACCAGGCCGGAGG
AGGGATCCACTTTACCGTGGAGCGCACGCGCCAAGCCACAGAGGAGGAGCTGTTCCGCTCCTTGCAGCAA
CGGCTCCAGTGCATGATGAGGGCTGGCACCACGCTGGTGGAGTGCAAGAGTGGATATGGCCTCGACCTGG
AGACCGAGCTCAAGATGCTGCGCGTGATTGAGCGCGCCCGGCGGGAGCTGGACATCGGCATCTCGGCTAC
CTACTGCGGGGCTCATTCAGTGCCTAAAGGAAAAACTGCTACTGAAGCTGCTGATGACATCATCAATAAC
CACCTCCCAAAGCTGAAGGAACTTGGCAGAAATGGGGAAATACACGTGGACAATATAGACGTATTTTGTG
AGAAAGGTGTCTTTGATCTCGATTCCACCAGAAGGATTCTTCAACGTGGAAAAGATATAGGGTTACAGAT
TAACTTCCATGGGGATGAACTCCACCCGATGAAGGCTGCTGAGCTTGGGGCTGAACTGGGAGCGCAGGCA
ATCAGCCACCTGGAAGAAGTGAGTGATGAAGGCATCGTTGCCATGGCAACGGCCAGGTGCTCTGCCATCC
TTCTGCCCACCACAGCCTACATGCTGAGACTGAAACAACCTCGAGCCAGGAAGATGTTAGATGAAGGAGT
AATAGTTGCTCTGGGAAGTGATTTCAACCCCAATGCATATTGCTTTTCAATGCCAATGGTCATGCATCTG
GCCTGTGTAAACATGAGAATGTCCATGCCTGAGGCCTTGGCCGCTGCCACCATCAATGCAGCTTATGCAC
TGGGAAAGTCTCACACACACGGATCGTTGGAAGTTGGCAAACAGGGAGATCTCATTATCATCAATTCATC
CCGATGGGAGCATTTGATTTACCAGTTCGGAGGCCATCATGAATTAATTGAATATGTTATAGCTAAAGGA
AAACTCATCTATAAAACATGA

Translation (426 aa):
MASGHSLLLENAQQVVLVCARGERFLARDALRSLAVLEGASLVVGKDGFIKAIGPADVIQRQFSGETFEE
IIDCSGKCILPGLVDAHTHPVWAGERVHEFAMKLAGATYMEIHQAGGGIHFTVERTRQATEEELFRSLQQ
RLQCMMRAGTTLVECKSGYGLDLETELKMLRVIERARRELDIGISATYCGAHSVPKGKTATEAADDIINN
HLPKLKELGRNGEIHVDNIDVFCEKGVFDLDSTRRILQRGKDIGLQINFHGDELHPMKAAELGAELGAQA
ISHLEEVSDEGIVAMATARCSAILLPTTAYMLRLKQPRARKMLDEGVIVALGSDFNPNAYCFSMPMVMHL
ACVNMRMSMPEALAAATINAAYALGKSHTHGSLEVGKQGDLIIINSSRWEHLIYQFGGHHELIEYVIAKG
KLIYKT


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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