NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS9381.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9381.1 Public Homo sapiens 13 DGKH 24 110 108 CCDS HistoryNCBI Gene:160851Re-query CCDS DB by CCDS ID:9381.1Re-query CCDS DB by GeneID:160851See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9381.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000337343.9 ENSP00000337572.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000337343.9Link to Ensembl Protein Viewer:ENSP00000337572.4Re-query CCDS DB by Nucleotide ID:ENST00000337343Re-query CCDS DB by Protein ID:ENSP00000337572
Original member Current member NCBI NM_178009.5 NP_821077.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_178009.5Link to Protein Sequence:NP_821077.1Re-query CCDS DB by Nucleotide ID:NM_178009Re-query CCDS DB by Protein ID:NP_821077Link to BLAST:NP_821077.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_821077.1 1220 Q86XP1-1 1220 100% 0 0

Chromosomal Locations for CCDS 9381.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 42048774 42048965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42127463 42127573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42129552 42129632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42155291 42155395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42155667 42155799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42159266 42159372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42160011 42160136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42165331 42165433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42166515 42166674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42168440 42168548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42168679 42168818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42174060 42174144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42178135 42178220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42187049 42187148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42189036 42189309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42190403 42190525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42194885 42195016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42198478 42198595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42199566 42199676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42199813 42199909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42206039 42206146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42208959 42209072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42209331 42209465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42210602 42210765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42214507 42214612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42215575 42215667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42219230 42219349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42219686 42219794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42221264 42221394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42229099 42229188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3663 nt):
ATGGCAGGGGCCGGAGGCCAGCACCACCCTCCGGGCGCCGCTGGAGGAGCGGCCGCCGGAGCCGGCGCCG
CG
GTCACCTCCGCCGCTGCCTCGGCGGGGCCGGGAGAGGATTCGTCTGACAGCGAAGCGGAGCAAGAGGG
A
CCCCAGAAACTGATCCGCAAAGTGTCTACCTCGGGGCAGATCCGGACCAAGACCAGTATTAAAGAGGGA
CAG
CTATTGAAGCAAACCAGTTCTTTCCAAAGGTGGAAAAAGCGATACTTCAAACTTCGAGGCCGCACCC
TT
TACTATGCAAAGGACTCAAAGTCTCTGATATTTGATGAAGTTGACCTCTCAGATGCTAGTGTAGCTGA
A
GCAAGCACGAAAAATGCTAACAACAGCTTCACGATCATCACTCCATTCAGAAGGCTAATGCTGTGTGCT
GAG
AACAGAAAGGAGATGGAGGATTGGATCAGCTCACTGAAGTCTGTACAGACCAGAGAACCCTACGAGG
TG
GCCCAGTTTAATGTGGAACATTTCTCAGGGATGCACAACTGGTACGCCTGCTCCCACGCCCGACCCAC
C
TTCTGTAACGTGTGCAGAGAGAGTCTTTCTGGAGTCACCTCCCATGGCCTGTCCTGCGAAGTGTGTAAA
TTC
AAGGCTCACAAAAGATGTGCAGTGAGAGCAACAAATAACTGTAAATGGACTACCCTGGCCTCCATCG
GG
AAGGACATTATAGAAGATGAAGATGGCGTCGCGATGCCTCACCAGTGGCTTGAGGGCAACCTGCCTGT
A
AGTGCCAAGTGTGCTGTCTGCGACAAAACATGTGGCAGTGTTCTCCGTCTACAGGATTGGAAATGCCTT
TGG
TGTAAGACAATGGTACACACTGCCTGCAAAGATTTATACCATCCAATATGTCCACTTGGTCAATGTA
AA
GTATCTATCATACCTCCAATTGCACTAAACAGCACCGATTCCGATGGTTTCTGTAGAGCAACATTTTC
G
TTCTGTGTTAGTCCTCTATTGGTTTTTGTCAATTCTAAGAGTGGAGATAATCAGGGAGTAAAGTTCCTC
CGT
CGCTTTAAACAGTTGCTAAATCCGGCTCAGGTGTTTGATTTAATGAATGGAGGTCCTCATTTAGGTT
TA
AGATTATTTCAGAAGTTTGACAATTTCCGGATTCTTGTTTGTGGAGGCGATGGAAGTGTAGGTTGGGT
T
TTGTCAGAAATCGATAAGCTCAACTTGAATAAACAGTGTCAGCTGGGAGTGTTGCCTTTGGGTACAGGA
AAT
GACCTTGCCCGAGTTCTTGGCTGGGGAGGTTCATATGACGATGACACCCAACTTCCTCAGATCCTAG
AG
AAACTGGAACGAGCCAGTACCAAAATGTTGGACAGGTGGAGTATAATGACATATGAACTCAAATTGCC
A
CCAAAAGCTTCCCTACTTCCAGGACCTCCAGAAGCATCTGAAGAATTTTATATGACGATTTATGAAGAC
TCA
GTTGCAACGCATCTTACAAAAATCCTCAATTCTGATGAACATGCAGTGGTCATATCTTCTGCCAAGA
CG
CTATGTGAAACTGTAAAGGACTTCGTTGCCAAAGTAGAAAAGACGTATGACAAAACCTTGGAAAATGC
C
GTTGTAGCTGATGCCGTGGCCAGTAAATGTTCAGTCCTAAACGAGAAGCTCGAACAACTGCTGCAGGCT
TTG
CACACAGATTCCCAGGCTGCGCCTGTTCTCCCTGGCCTCAGCCCTCTCATTGTGGAAGAAGATGCTG
TG
GAATCGTCCAGTGAAGAGTCCCTGGGTGAAAGCAAAGAGCAGCTTGGGGATGACGTTACAAAACCTTC
C
TCCCAGAAAGCCGTCAAACCAAGGGAAATCATGTTGCGGGCAAATAGTTTAAAGAAAGCAGTGAGGCAA
GTC
ATTGAGGAAGCCGGAAAAGTTATGGATGACCCGACAGTTCACCCCTGTGAACCAGCTAATCAGTCCT
CT
GATTATGACAGCACAGAAACAGATGAATCTAAGGAGGAAGCTAAAGATGATGGTGCCAAAGAATCAAT
A
ACTGTTAAAACTGCACCTCGGTCTCCAGATGCCCGGGCAAGTTATGGCCATTCCCAAACTGATTCTGTC
CCT
GGTCCAGCTGTGGCAGCCAGCAAAGAAAACCTCCCTGTGCTCAATACCAGAATAATCTGCCCAGGTT
TA
AGAGCAGGACTGGCTGCCTCAATTGCTGGGAGTTCGATTATCAACAAAATGTTACTGGCAAACATTGA
T
CCTTTTGGTGCCACGCCGTTTATTGACCCGGATCTAGATTCCGTAGATGGATATTCAGAAAAATGTGTC
ATG
AACAATTACTTTGGGATTGGATTAGATGCAAAAATTTCATTAGAATTTAATAATAAAAGAGAGGAGC
AC
CCTGAAAAATGCAGGAGCCGAACTAAAAACTTGATGTGGTATGGAGTCCTTGGAACCCGGGAGTTATT
A
CAGAGATCGTACAAGAATTTAGAACAAAGGGTTCAACTTGAGTGTGATGGGCAGTATATTCCTCTTCCC
AGC
TTGCAAGGCATAGCCGTGTTGAACATTCCCAGCTATGCTGGAGGCACTAACTTTTGGGGTGGAACTA
AA
GAGGATGATATATTTGCTGCACCATCCTTTGATGACAAGATCCTGGAAGTTGTAGCAATATTTGATAG
C
ATGCAAATGGCAGTTTCAAGGGTCATTAAACTGCAGCATCATCGAATAGCCCAGTGCCGTACAGTGAAA
ATC
ACTATATTTGGTGACGAAGGAGTCCCAGTGCAAGTGGATGGTGAAGCGTGGGTTCAGCCTCCAGGGA
TT
ATCAAAATTGTGCACAAAAACAGAGCACAAATGCTAACAAGGGACAGAGCCTTTGAGAGCACTCTGAA
A
TCTTGGGAAGATAAGCAGAAGTGTGATTCTGGTAAACCAGTTCTCCGAACCCATTTGTACATCCATCAC
GCC
ATTGACTTGGCAACAGAAGAGGTGTCGCAGATGCAGCTATGCTCCCAGGCTGCAGAGGAGCTCATTA
CT
AGGATATGTGACGCAGCCACAATTCACTGTCTTTTGGAGCAAGAACTGGCCCATGCTGTGAATGCCTG
C
TCCCATGCCCTGAATAAAGCCAACCCAAGGTGCCCGGAGAGTCTTACAAGAGACACTGCCACTGAAATA
GCC
ATCAATGTGAAGGCGCTGTATAATGAAACAGAATCTTTGCTAGTTGGCAGGGTTCCTTTGCAGCTGG
AA
TCGCCACATGAAGAGCGAGTATCCAATGCCTTACACTCTGTGGAGGTGGAATTACAGAAACTGACAGA
G
ATTCCTTGGCTTTATTATATCTTACACCCAAATGAGGATGAGGAACCTCCTATGGATTGCACCAAAAGG
AAC
AACAGAAGCACCGTATTTCGAATAGTGCCAAAGTTTAAAAAGGAAAAGGTTCAGAAGCAGAAGACAA
GT
TCACAGCCTGTTCAGAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGA
G
TACAAAGATATCTTCATCCGTCATGACATCAGAGGGGCTGAACTTTTGCATCTGGAAAGGCGAGATCTT
AAG
GATCTGGGGATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGGAAGGA
GC
ACTCCACAGTCGGAGGTGTAA


Translation (1220 aa):
MAGAGGQHHPPGAAGGAAAGAGAAVTSAAASAGPGEDSSDSEAEQEGPQKLIRKVSTSGQIRTKTSIKEG
Q
LLKQTSSFQRWKKRYFKLRGRTLYYAKDSK
SLIFDEVDLSDASVAEASTKNANNSFTIITPFRRLMLCA
E
NRKEMEDWISSLKSVQTREPYE
VAQFNVEHFSGMHNWYACSHARPTFCNVCRESLSGVTSHGLSCEVCK
F
KAHKRCAVRATNNCKWTTLASIGKDIIEDEDG
VAMPHQWLEGNLPVSAKCAVCDKTCGSVLRLQDWKCL
W
CKTM
VHTACKDLYHPICPLGQCKVSIIPPIALNSTDSDGFCRATFSFCVSPLLVFVNSKSGDNQGVKFL
R
RFKQLLNPAQVFDLMNGGPHL
GLRLFQKFDNFRILVCGGDGSVGWVLSEIDKLNLNKQCQLGVLPLGTG
N
DLARVLGWGGSYDDDTQLPQILEKLERASTKMLD
RWSIMTYELKLPPKASLLPGPPEASEEFYMTIYED
S
VATHLTKILNSDEHAVVISSA
KTLCETVKDFVAKVEKTYDKTLENAVVADAVASKCSVLNEKLEQLLQA
L
HTDSQAAPVLPGLSPLIVEEDAVESSSEESLGESKEQLGDDVTKPSSQKAVKPREIMLRANSLKKAVRQ
V
IEEAGK
VMDDPTVHPCEPANQSSDYDSTETDESKEEAKDDGAKESITVKTAPRSPDARASYGHSQTDSV
P
GPAVAASKENLPVLNTRIICP
GLRAGLAASIAGSSIINKMLLANIDPFGATPFIDPDLDSVDGYSEKCV
M
NNYFGIGLDAKISLEFNNKREEHPEKC
RSRTKNLMWYGVLGTRELLQRSYKNLEQRVQLECDGQYIPLP
S
LQGIAVLNIPSYAGGTNFWGGTKEDD
IFAAPSFDDKILEVVAIFDSMQMAVSRVIKLQHHRIAQCRTVK
I
TIFGDEGVPVQVDGEAWVQPPGIIKIVHKNRAQMLTRDR
AFESTLKSWEDKQKCDSGKPVLRTHLYIHH
A
IDLATEEVSQMQLCSQAAEELIT
RICDAATIHCLLEQELAHAVNACSHALNKANPRCPESLTRDTATEI
A
INVKALYNETESLLVGRVPL
QLESPHEERVSNALHSVEVELQKLTEIPWLYYILHPNEDEEPPMDCTKR
N
NRSTVFRIVPKFKKEKVQKQKTSSQP
VQKWGTEEVAAWLDLLNLGEYKDIFIRHDIRGAELLHLERRDL
K
DLGIPKVGHVKRILQGIKELGRSTPQSEV



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser