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Report for CCDS9712.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9712.1 Public Homo sapiens 14 GNPNAT1 24 110 108 CCDS HistoryNCBI Gene:64841Re-query CCDS DB by CCDS ID:9712.1Re-query CCDS DB by GeneID:64841See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9712.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000216410.8 ENSP00000216410.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000216410.8Link to Ensembl Protein Viewer:ENSP00000216410.3Re-query CCDS DB by Nucleotide ID:ENST00000216410Re-query CCDS DB by Protein ID:ENSP00000216410
Original member Current member EBI ENST00000650397.1 ENSP00000496934.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000650397.1Link to Ensembl Protein Viewer:ENSP00000496934.1Re-query CCDS DB by Nucleotide ID:ENST00000650397Re-query CCDS DB by Protein ID:ENSP00000496934
Original member Current member NCBI NM_198066.4 NP_932332.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198066.4Link to Protein Sequence:NP_932332.1Re-query CCDS DB by Nucleotide ID:NM_198066Re-query CCDS DB by Protein ID:NP_932332Link to BLAST:NP_932332.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_932332.1 184 Q96EK6 184 100% 0 0

Chromosomal Locations for CCDS 9712.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 52778311 52778458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52780679 52780740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52781784 52781911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52783423 52783485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52784497 52784650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (555 nt):
ATGAAACCTGATGAAACTCCTATGTTTGACCCAAGTCTACTCAAAGAAGTGGACTGGAGTCAGAATACAG
CT
ACATTTTCTCCAGCCATTTCCCCAACACATCCTGGAGAAGGCTTGGTTTTGAGGCCTCTTTGTACTGC
T
GACTTAAATAGAGGTTTTTTTAAGGTATTGGGTCAGCTAACAGAGACTGGAGTTGTCAGCCCTGAACAA
TTT
ATGAAATCTTTTGAGCATATGAAGAAATCTGGGGATTATTATGTTACAGTTGTAGAAGATGTGACTC
TA
GGACAGATTGTTGCTACGGCAACTCTGATTATAGAACATAAATTCATCCATTCCTGTGCTAAGAGAGG
A
AGAGTAGAAGATGTTGTTGTTAGTGATGAATGCAGAGGAAAGCAGCTTGGCAAATTGTTATTATCAACC
CTT
ACTTTGCTAAGCAAGAAACTGAACTGTTACAAGATTACCCTTGAATGTCTACCACAAAATGTTGGTT
TC
TATAAAAAGTTTGGATATACTGTATCTGAAGAAAACTACATGTGTCGGAGGTTTCTAAAGTAA


Translation (184 aa):
MKPDETPMFDPSLLKEVDWSQNTATFSPAISPTHPGEGLVLRPLCTADLNRGFFKVLGQLTETGVVSPEQ
F
M
KSFEHMKKSGDYYVTVVEDVTLGQIVATATLIIEHKFIHSCAKRGRVEDVVVSDECRGKQLGKLLLST
L
TLLSKKLNCYKITLECLPQNVGFYKKFGYTVSEENYMCRRFLK




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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