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Report for CCDS9956.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9956.1 Public Homo sapiens 14 DEGS2 24 110 108 CCDS HistoryNCBI Gene:123099Re-query CCDS DB by CCDS ID:9956.1Re-query CCDS DB by GeneID:123099See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9956.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000305631.7 ENSP00000307126.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000305631.7Link to Ensembl Protein Viewer:ENSP00000307126.5Re-query CCDS DB by Nucleotide ID:ENST00000305631Re-query CCDS DB by Protein ID:ENSP00000307126
Original member Current member NCBI NM_206918.3 NP_996801.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_206918.3Link to Protein Sequence:NP_996801.2Re-query CCDS DB by Nucleotide ID:NM_206918Re-query CCDS DB by Protein ID:NP_996801Link to BLAST:NP_996801.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_996801.2 323 Q6QHC5 323 100% 0 0

Chromosomal Locations for CCDS 9956.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 100146761 100146907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 100148968 100149710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 100159506 100159587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (972 nt):
ATGGGCAACAGCGCGAGCCGCAGCGACTTCGAGTGGGTCTACACCGACCAGCCGCACACGCAGCGGCGCA
AGGAGATACTGGCCAAGTACCCGGCCATCAAGGCCCTGATGCGGCCAGACCCGCGCCTCAAGTGGGCGGT
GCTGGTGCTGGTGCTGGTGCAGATGCTGGCCTGCTGGCTGGTGCGCGGGCTGGCCTGGCGCTGGCTGCTG
TTCTGGGCCTACGCCTTTGGTGGCTGCGTGAACCACTCGCTGACGCTGGCCATCCACGACATCTCGCACA
ACGCGGCCTTCGGCACGGGCCGTGCGGCACGCAACCGCTGGCTGGCCGTGTTCGCCAACCTGCCCGTGGG
TGTGCCCTACGCCGCCTCCTTCAAGAAGTACCACGTGGACCACCACCGCTACCTGGGCGGCGACGGGCTG
GACGTGGACGTGCCCACGCGTCTGGAGGGCTGGTTCTTCTGCACACCCGCCCGCAAGCTGCTCTGGCTGG
TGCTGCAGCCCTTCTTCTACTCACTACGGCCGCTCTGCGTCCACCCCAAGGCCGTGACCCGCATGGAGGT
GCTCAACACGCTGGTGCAGCTGGCGGCCGACCTGGCCATCTTTGCCCTTTGGGGGCTCAAGCCCGTGGTC
TACCTGCTGGCCAGCTCCTTCCTGGGCCTGGGCCTGCACCCCATCTCGGGCCACTTCGTGGCCGAGCACT
ACATGTTCCTCAAGGGCCACGAGACCTACTCCTACTATGGGCCTCTCAACTGGATCACCTTCAATGTGGG
CTACCACGTGGAGCACCACGACTTCCCCAGCATCCCGGGCTACAACCTGCCGCTGGTGCGGAAGATCGCG
CCCGAGTACTACGACCACCTGCCGCAGCACCACTCCTGGGTGAAGGTGCTCTGGGATTTTGTGTTTGAGG
ACTCCCTGGGGCCCTATGCCAGGGTGAAGCGGGTGTACAGGCTGGCAAAAGATGGTCTGTGA

Translation (323 aa):
MGNSASRSDFEWVYTDQPHTQRRKEILAKYPAIKALMRPDPRLKWAVLVLVLVQMLACWLVRGLAWRWLL
FWAYAFGGCVNHSLTLAIHDISHNAAFGTGRAARNRWLAVFANLPVGVPYAASFKKYHVDHHRYLGGDGL
DVDVPTRLEGWFFCTPARKLLWLVLQPFFYSLRPLCVHPKAVTRMEVLNTLVQLAADLAIFALWGLKPVV
YLLASSFLGLGLHPISGHFVAEHYMFLKGHETYSYYGPLNWITFNVGYHVEHHDFPSIPGYNLPLVRKIA
PEYYDHLPQHHSWVKVLWDFVFEDSLGPYARVKRVYRLAKDGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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