CHEBI:28794 - coumarin

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ChEBI Name coumarin
ChEBI ID CHEBI:28794
Definition A chromenone having the keto group located at the 2-position.
Stars This entity has been manually annotated by the ChEBI Team.
Secondary ChEBI IDs CHEBI:3906, CHEBI:41552, CHEBI:101256, CHEBI:23402
Supplier Information ChemicalBook:CB3112168, eMolecules:494397, Selleckchem:coumarin, ZINC000000074709
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Coumarin () or 2H-chromen-2-one is an aromatic organic chemical compound with formula C9H6O2. Its molecule can be described as a benzene molecule with two adjacent hydrogen atoms replaced by an unsaturated lactone ring −(CH)=(CH)−(C=O)−O−, forming a second six-membered heterocycle that shares two carbons with the benzene ring. It belongs to the benzopyrone chemical class and is considered a lactone. Coumarin is a colorless crystalline solid with a sweet odor resembling the scent of vanilla and a bitter taste. It is found in many plants, where it may serve as a chemical defense against predators. While coumarin is not an anticoagulant, its 3-alkyl-4-hydroxy derivatives, such as the fungal metabolite dicoumarol, inhibit synthesis of vitamin K, a key component in blood clotting. A related compound, the prescription drug anticoagulant warfarin, is used to inhibit formation of blood clots, deep vein thrombosis, and pulmonary embolism.
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Formula C9H6O2
Net Charge 0
Average Mass 146.145
Monoisotopic Mass 146.03678
InChI InChI=1S/C9H6O2/c10-9-6-5-7-3-1-2-4-8(7)11-9/h1-6H
InChIKey ZYGHJZDHTFUPRJ-UHFFFAOYSA-N
SMILES O=C1OC2=CC=CC=C2C=C1
Metabolite of Species Details
Eupatorium cannabinum subsp. asiaticum (NCBI:txid102770) Found in aerial part (BTO:0001658). MeOH extract of shade-dried, pulverized aerial parts See: PubMed
Homo sapiens (NCBI:txid9606) See: DOI
Roles Classification
Biological Role(s): human metabolite
Any mammalian metabolite produced during a metabolic reaction in humans (Homo sapiens).
plant metabolite
Any eukaryotic metabolite produced during a metabolic reaction in plants, the kingdom that include flowering plants, conifers and other gymnosperms.
Application(s): fluorescent dye

View more via ChEBI Ontology
ChEBI Ontology
Outgoing coumarin (CHEBI:28794) has role fluorescent dye (CHEBI:51121)
coumarin (CHEBI:28794) has role human metabolite (CHEBI:77746)
coumarin (CHEBI:28794) has role plant metabolite (CHEBI:76924)
coumarin (CHEBI:28794) is a coumarins (CHEBI:23403)
Incoming 3,4-dihydrocoumarin (CHEBI:16151) has functional parent coumarin (CHEBI:28794)
3-(4-chlorophenyl)-2H-1-benzopyran-2-one (CHEBI:79706) has functional parent coumarin (CHEBI:28794)
4-ethyl-7-hydroxy-3-(p-methoxyphenyl)coumarin (CHEBI:34403) has functional parent coumarin (CHEBI:28794)
5,6,7-trimethoxycoumarin (CHEBI:28126) has functional parent coumarin (CHEBI:28794)
6,8-difluoro-4-methylumbelliferyl phosphate (CHEBI:133848) has functional parent coumarin (CHEBI:28794)
6,8-difluoro-4-methylumbelliferyl phosphate (2−) (CHEBI:133849) has functional parent coumarin (CHEBI:28794)
7-hydroxy-3-(4-methoxyphenyl)-4-methylcoumarin (CHEBI:79572) has functional parent coumarin (CHEBI:28794)
7-hydroxy-3-(4-methoxyphenyl)-4-propyl-2H-1-benzopyran-2-one (CHEBI:79571) has functional parent coumarin (CHEBI:28794)
7-methoxycoumarin-4-acetic acid (CHEBI:51666) has functional parent coumarin (CHEBI:28794)
daphnoretin (CHEBI:4324) has functional parent coumarin (CHEBI:28794)
licoarylcoumarin (CHEBI:69100) has functional parent coumarin (CHEBI:28794)
7-[(6-hydroxy-2,5,5,8a-tetramethyl-4-oxo-1,4,4a,5,6,7,8,8a-octahydro-1-naphthalenyl)methoxy]-2H-chromen-2-one (CHEBI:141536) is a coumarin (CHEBI:28794)
IUPAC Name
2H-chromen-2-one
Synonyms Sources
1,2-Benzopyrone KEGG COMPOUND
2-Propenoic acid, 3-(2-hydroxyphenyl)-, d-lactone KEGG COMPOUND
2-Propenoic acid, 3-(2-hydroxyphenyl)-, delta-lactone KEGG COMPOUND
2H-1-Benzopyran-2-one KEGG COMPOUND
2H-benzo[b]pyran-2-one NIST Chemistry WebBook
5,6-Benzo-2-pyrone KEGG COMPOUND
Benzo-a-pyrone KEGG COMPOUND
Benzo-alpha-pyrone KEGG COMPOUND
cis-o-Coumarinic acid lactone KEGG COMPOUND
Coumarine KEGG COMPOUND
Coumarine KEGG COMPOUND
Coumarinic anhydride KEGG COMPOUND
Cumarin KEGG COMPOUND
o-hydroxycinnamic acid δ-lactone NIST Chemistry WebBook
o-Hydroxycinnamic acid lactone KEGG COMPOUND
Rattex KEGG COMPOUND
Tonka bean camphor KEGG COMPOUND
Manual Xrefs Databases
738 DrugCentral
C00002460 KNApSAcK
C05851 KEGG COMPOUND
COU PDBeChem
Coumarin Wikipedia
COUMARIN MetaCyc
D07751 KEGG DRUG
DB04665 DrugBank
HMDB0001218 HMDB
LSM-2519 LINCS
View more database links
Registry Numbers Types Sources
165222 Gmelin Registry Number Gmelin
383644 Reaxys Registry Number Reaxys
91-64-5 CAS Registry Number NIST Chemistry WebBook
91-64-5 CAS Registry Number ChemIDplus
Citations
Keller AN, Eckle SB, Xu W, Liu L, Hughes VA, Mak JY, Meehan BS, Pediongco T, Birkinshaw RW, Chen Z, Wang H, D'Souza C, Kjer-Nielsen L, Gherardin NA, Godfrey DI, Kostenko L, Corbett AJ, Purcell AW, Fairlie DP, McCluskey J, Rossjohn J (2017)
Drugs and drug-like molecules can modulate the function of mucosal-associated invariant T cells.
Nature immunology 18, 402-411 [PubMed:28166217]
[show Abstract]
Weigt S, Huebler N, Strecker R, Braunbeck T, Broschard TH (2012)
Developmental effects of coumarin and the anticoagulant coumarin derivative warfarin on zebrafish (Danio rerio) embryos.
Reproductive toxicology (Elmsford, N.Y.) 33, 133-141 [PubMed:21798343]
[show Abstract]
Marcolan M, Martins PA, Pedrosa VA, Rodrigues MR, de Oliveira HP, Codognoto L (2011)
Spectrofluorimetric determination of coumarin in commercial tablets.
Journal of fluorescence 21, 733-738 [PubMed:21046436]
[show Abstract]
Abraham K, Pfister M, Wöhrlin F, Lampen A (2011)
Relative bioavailability of coumarin from cinnamon and cinnamon-containing foods compared to isolated coumarin: a four-way crossover study in human volunteers.
Molecular nutrition & food research 55, 644-653 [PubMed:21462332]
[show Abstract]
Spiegelhauer O, Mende S, Dickert F, Knauer SH, Ullmann GM, Dobbek H (2010)
Cysteine as a modulator residue in the active site of xenobiotic reductase A: a structural, thermodynamic and kinetic study.
Journal of molecular biology 398, 66-82 [PubMed:20206186]
[show Abstract]
Coltro WK, Lunte SM, Carrilho E (2008)
Comparison of the analytical performance of electrophoresis microchannels fabricated in PDMS, glass, and polyester-toner.
Electrophoresis 29, 4928-4937 [PubMed:19025869]
[show Abstract]
Vocanson M, Valeyrie M, Rozières A, Hennino A, Floc'h F, Gard A, Nicolas JF (2007)
Lack of evidence for allergenic properties of coumarin in a fragrance allergy mouse model.
Contact dermatitis 57, 361-364 [PubMed:17988284]
[show Abstract]
Griese JJ, P Jakob R, Schwarzinger S, Dobbek H (2006)
Xenobiotic reductase A in the degradation of quinoline by Pseudomonas putida 86: physiological function, structure and mechanism of 8-hydroxycoumarin reduction.
Journal of molecular biology 361, 140-152 [PubMed:16822524]
[show Abstract]
Yano JK, Hsu MH, Griffin KJ, Stout CD, Johnson EF (2005)
Structures of human microsomal cytochrome P450 2A6 complexed with coumarin and methoxsalen.
Nature structural & molecular biology 12, 822-823 [PubMed:16086027]
[show Abstract]
Krasteva M, Peguet-Navarro J, Moulon C, Courtellemont P, Redziniak G, Schmitt D (1996)
In vitro primary sensitization of hapten-specific T cells by cultured human epidermal Langerhans cells--a screening predictive assay for contact sensitizers.
Clinical and experimental allergy : journal of the British Society for Allergy and Clinical Immunology 26, 563-570 [PubMed:8735869]
[show Abstract]
Last Modified
28 May 2021