uridine 5'-monophosphate (CHEBI:16695)

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CHEBI:16695 - uridine 5'-monophosphate

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ChEBI Name	uridine 5'-monophosphate

ChEBI ID	CHEBI:16695

Definition	A pyrimidine ribonucleoside 5'-monophosphate having uracil as the nucleobase.

Stars	This entity has been manually annotated by the ChEBI Team.

Secondary ChEBI IDs	CHEBI:46381, CHEBI:47721, CHEBI:46362, CHEBI:46382, CHEBI:46385, CHEBI:13509, CHEBI:9849, CHEBI:27231, CHEBI:13508

Supplier Information	ZINC000002510048

Download	Molfile XML SDF

more structures >>

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Marvin 07210811523D

34 35 0 0 0 0 999 V2000

2.3111 -0.4690 -0.6084 N 0 0 0 0 0 0 0 0 0 0 0 0

2.7403 0.3532 0.3658 C 0 0 0 0 0 0 0 0 0 0 0 0

4.0425 0.6717 0.4780 N 0 0 0 0 0 0 0 0 0 0 0 0

4.9419 0.1751 -0.3958 C 0 0 0 0 0 0 0 0 0 0 0 0

4.5028 -0.6879 -1.4289 C 0 0 0 0 0 0 0 0 0 0 0 0

3.1909 -0.9940 -1.5153 C 0 0 0 0 0 0 0 0 0 0 0 0

1.9409 0.8087 1.1610 O 0 0 0 0 0 0 0 0 0 0 0 0

6.1203 0.4660 -0.2975 O 0 0 0 0 0 0 0 0 0 0 0 0

-3.1289 3.2937 -0.0943 P 0 0 2 0 0 0 0 0 0 0 0 0

-4.3391 2.7515 0.5629 O 0 0 0 0 0 0 0 0 0 0 0 0

-2.2189 4.0496 0.9969 O 0 0 0 0 0 0 0 0 0 0 0 0

-3.5634 4.3343 -1.2439 O 0 0 0 0 0 0 0 0 0 0 0 0

4.3357 1.2635 1.1892 H 0 0 0 0 0 0 0 0 0 0 0 0

5.2081 -1.0953 -2.1376 H 0 0 0 0 0 0 0 0 0 0 0 0

2.8376 -1.6511 -2.2970 H 0 0 0 0 0 0 0 0 0 0 0 0

0.8876 -0.8012 -0.7028 C 0 0 1 0 0 0 0 0 0 0 0 0

0.4405 -1.6095 0.5352 C 0 0 2 0 0 0 0 0 0 0 0 0

0.4175 -3.0079 0.2428 O 0 0 0 0 0 0 0 0 0 0 0 0

-0.9867 -1.0939 0.8256 C 0 0 1 0 0 0 0 0 0 0 0 0

-1.2362 -0.0339 -0.2702 C 0 0 2 0 0 0 0 0 0 0 0 0

-1.9354 -2.1575 0.7172 O 0 0 0 0 0 0 0 0 0 0 0 0

0.0849 0.3988 -0.6685 O 0 0 0 0 0 0 0 0 0 0 0 0

-2.0360 1.1439 0.2908 C 0 0 0 0 0 0 0 0 0 0 0 0

-2.2892 2.0876 -0.7521 O 0 0 0 0 0 0 0 0 0 0 0 0

0.6890 -1.3648 -1.6151 H 0 0 0 0 0 0 0 0 0 0 0 0

1.0984 -1.4077 1.3811 H 0 0 0 0 0 0 0 0 0 0 0 0

0.0742 -3.4526 1.0295 H 0 0 0 0 0 0 0 0 0 0 0 0

-1.0353 -0.6402 1.8145 H 0 0 0 0 0 0 0 0 0 0 0 0

-1.7614 -0.4793 -1.1151 H 0 0 0 0 0 0 0 0 0 0 0 0

-1.7129 -2.8018 1.4038 H 0 0 0 0 0 0 0 0 0 0 0 0

-2.9831 0.7822 0.6915 H 0 0 0 0 0 0 0 0 0 0 0 0

-1.4650 1.6245 1.0853 H 0 0 0 0 0 0 0 0 0 0 0 0

-1.4432 4.3870 0.5286 H 0 0 0 0 0 0 0 0 0 0 0 0

-4.0626 5.0384 -0.8082 H 0 0 0 0 0 0 0 0 0 0 0 0

1 2 1 0 0 0 0

1 6 1 0 0 0 0

1 16 1 0 0 0 0

2 3 1 0 0 0 0

2 7 2 0 0 0 0

3 4 1 0 0 0 0

3 13 1 0 0 0 0

4 5 1 0 0 0 0

4 8 2 0 0 0 0

5 6 2 0 0 0 0

5 14 1 0 0 0 0

6 15 1 0 0 0 0

9 10 2 0 0 0 0

9 11 1 0 0 0 0

9 12 1 0 0 0 0

11 33 1 0 0 0 0

12 34 1 0 0 0 0

16 17 1 0 0 0 0

16 22 1 0 0 0 0

16 25 1 0 0 0 0

17 18 1 0 0 0 0

17 19 1 0 0 0 0

17 26 1 0 0 0 0

18 27 1 0 0 0 0

19 20 1 0 0 0 0

19 21 1 0 0 0 0

19 28 1 0 0 0 0

20 22 1 0 0 0 0

20 23 1 0 0 0 0

20 29 1 0 0 0 0

21 30 1 0 0 0 0

23 24 1 0 0 0 0

23 31 1 0 0 0 0

23 32 1 0 0 0 0

24 9 1 0 0 0 0

M END): 19 ms

reading 34 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

Default Van der Waals type for model set to Babel

34 atoms created

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Wikipedia	License
L-Tyrosine or tyrosine (symbol Tyr or Y) or 4-hydroxyphenylalanine is one of the 20 standard amino acids that are used by cells to synthesize proteins. It is a conditionally essential amino acid with a polar side group. The word "tyrosine" is from the Greek tyrós, meaning cheese, as it was first discovered in 1846 by German chemist Justus von Liebig in the protein casein from cheese. It is called tyrosyl when referred to as a functional group or side chain. While tyrosine is generally classified as a hydrophobic amino acid, it is more hydrophilic than phenylalanine. It is encoded by the codons UAC and UAU in messenger RNA. The one-letter symbol Y was assigned to tyrosine for being alphabetically nearest of those letters available. Note that T was assigned to the structurally simpler threonine, U was avoided for its similarity with V for valine, W was assigned to tryptophan, while X was reserved for undetermined or atypical amino acids. The mnemonic tYrosine was also proposed.
Read full article at Wikipedia

Formula

C9H13N2O9P

Net Charge

Average Mass

324.18136

Monoisotopic Mass

324.03587

InChI

InChI=1S/C9H13N2O9P/c12-5-1-2-11(9(15)10-5)8-7(14)6(13)4(20-8)3-19-21(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,10,12,15)(H2,16,17,18)/t4-,6-,7-,8-/m1/s1

InChIKey

DJJCXFVJDGTHFX-XVFCMESISA-N

SMILES

O[C@@H]1[C@@H](COP(O)(O)=O)O[C@H]([C@@H]1O)n1ccc(=O)[nH]c1=O

Metabolite of Species	Details
Mus musculus (NCBI:txid10090)	Source: BioModels - MODEL1507180067 See: PubMed
Escherichia coli (NCBI:txid562)	See: PubMed

Roles Classification
Biological Role(s):	Escherichia coli metabolite Any bacterial metabolite produced during a metabolic reaction in Escherichia coli. mouse metabolite Any mammalian metabolite produced during a metabolic reaction in a mouse (Mus musculus). human metabolite Any mammalian metabolite produced during a metabolic reaction in humans (Homo sapiens).

View more via ChEBI Ontology

ChEBI Ontology
Outgoing	uridine 5'-monophosphate (CHEBI:16695) has role Escherichia coli metabolite (CHEBI:76971) uridine 5'-monophosphate (CHEBI:16695) has role human metabolite (CHEBI:77746) uridine 5'-monophosphate (CHEBI:16695) has role mouse metabolite (CHEBI:75771) uridine 5'-monophosphate (CHEBI:16695) is a pyrimidine ribonucleoside 5'-monophosphate (CHEBI:39457) uridine 5'-monophosphate (CHEBI:16695) is a uridine 5'-phosphate (CHEBI:27232) uridine 5'-monophosphate (CHEBI:16695) is conjugate acid of uridine 5'-monophosphate(2−) (CHEBI:57865)

Incoming	2'-O-methyluridine 5'-monophosphate (CHEBI:44642) has functional parent uridine 5'-monophosphate (CHEBI:16695) 5,6-dihydrouridine 5'-monophosphate (CHEBI:74673) has functional parent uridine 5'-monophosphate (CHEBI:16695) 5-(2-methoxy-2-oxoethyl)uridine 5'-monophosphate (CHEBI:75650) has functional parent uridine 5'-monophosphate (CHEBI:16695) 5-aminomethyl-2-thiouridine 5'-monophosphate (CHEBI:74678) has functional parent uridine 5'-monophosphate (CHEBI:16695) 5-bromouridine 5'-monophosphate (CHEBI:47131) has functional parent uridine 5'-monophosphate (CHEBI:16695) 5-carboxymethylaminomethyl-2'-O-methyluridine 5'-monophosphate (CHEBI:74785) has functional parent uridine 5'-monophosphate (CHEBI:16695) 5-carboxymethylaminomethyluridine 5'-monophosphate (CHEBI:74782) has functional parent uridine 5'-monophosphate (CHEBI:16695) 5-fluorouridine 5'-monophosphate (CHEBI:40101) has functional parent uridine 5'-monophosphate (CHEBI:16695) 5-methylaminomethyl-2-thiouridine 5'-monophosphate (CHEBI:74680) has functional parent uridine 5'-monophosphate (CHEBI:16695) 6-oxouridine 5'-phosphate (CHEBI:41150) has functional parent uridine 5'-monophosphate (CHEBI:16695) N³-methyluridine 5'-monophosphate (CHEBI:74773) has functional parent uridine 5'-monophosphate (CHEBI:16695) O^4'-(5'-uridylyl)-L-tyrosine (CHEBI:21989) has functional parent uridine 5'-monophosphate (CHEBI:16695) ddhUMP (CHEBI:156340) has functional parent uridine 5'-monophosphate (CHEBI:16695) sofosbuvir (CHEBI:85083) has functional parent uridine 5'-monophosphate (CHEBI:16695) uracil octosyl acid 5'-phosphate (CHEBI:133866) has functional parent uridine 5'-monophosphate (CHEBI:16695) uridine 5'-monophosphate(2−) (CHEBI:57865) is conjugate base of uridine 5'-monophosphate (CHEBI:16695) UMP 3'-end residue (CHEBI:53120) is substituent group from uridine 5'-monophosphate (CHEBI:16695) UMP 5'-end residue (CHEBI:53105) is substituent group from uridine 5'-monophosphate (CHEBI:16695) uridine 5'-monophosphate residue (CHEBI:46470) is substituent group from uridine 5'-monophosphate (CHEBI:16695)

IUPAC Name

5'-uridylic acid

Synonyms	Sources
5'-UMP	ChemIDplus
5'Uridylic acid	KEGG COMPOUND
pU	CBN
pU	ChEBI
UMP	KEGG COMPOUND
uridine 5'-(dihydrogen phosphate)	ChemIDplus
Uridine 5'-monophosphate	KEGG COMPOUND
uridine 5'-phosphate	ChemIDplus
uridine 5'-phosphoric acid	ChemIDplus
Uridine monophosphate	KEGG COMPOUND
URIDINE-5'-MONOPHOSPHATE	PDBeChem
uridylate	ChEBI
Uridylic acid	KEGG COMPOUND

Manual Xrefs	Databases
C00007311	KNApSAcK
C00105	KEGG COMPOUND
DB03685	DrugBank
HMDB0000288	HMDB
U5PrF10	PDBeChem
UMP	MetaCyc
UrF10	PDBeChem
Uridine_monophosphate	Wikipedia
View more database links

Registry Numbers	Types	Sources
310455	Gmelin Registry Number	Gmelin
47486	Reaxys Registry Number	Reaxys
58-97-9	CAS Registry Number	ChemIDplus

Citations

Last Modified

05 December 2017

CHEBI:16695 - uridine 5'-monophosphate

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