Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SHMT1 ENSBTAG00000017094

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Description

serine hydroxymethyltransferase 1 [Source:VGNC Symbol;Acc:VGNC:34603]

Location

Primary_assembly 19: 34,335,014-34,350,203 forward strand.

ARS-UCD1.3:CM008186.2

About this gene

This gene has 3 transcripts (splice variants), 215 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000022732.7	SHMT1-201	2536	484aa	ENSBTAP00000022732.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140T896	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000084693.2	SHMT1-202	2506	474aa	ENSBTAP00000057116.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LKF4	-
ENSBTAT00000113136.1	SHMT1-203	2419	445aa	ENSBTAP00000096351.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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