Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SMC1A ENSBTAG00000017761

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Description

structural maintenance of chromosomes 1A [Source:VGNC Symbol;Acc:VGNC:34997]

Location

Primary_assembly X: 90,808,636-90,856,007 reverse strand.

ARS-UCD1.3:CM008197.2

About this gene

This gene has 6 transcripts (splice variants), 208 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000131220.1	SMC1A-201	4252	1240aa	ENSBTAP00000080333.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000113776.1	SMC1A-203	4769	1233aa	ENSBTAP00000090290.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000133328.1	SMC1A-204	4500	1099aa	ENSBTAP00000084979.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000023619.5	SMC1A-202	3817	1238aa	ENSBTAP00000023619.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O97593	-
ENSBTAT00000096692.1	SMC1A-206	594	175aa	ENSBTAP00000080104.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000080764.2	SMC1A-205	546	159aa	ENSBTAP00000063628.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M0W1	-

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Summary

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