Gene: KRT12 ENSG00000187242

Description

keratin 12 [Source:HGNC Symbol;Acc:HGNC:6414]

Gene Synonyms

K12

Location

Chromosome 17: 40,861,303-40,867,223 reverse strand.

GRCh38:CM000679.2

View alleles of this gene on alternative sequences

About this gene

This gene has 5 transcripts (splice variants), 1 gene allele, 141 orthologues, 68 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000251643.5	KRT12-201	1880	494aa	ENSP00000251643.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11378	Q99456	NM_000223.4	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000647902.1	KRT12-202	632	206aa	ENSP00000497770.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3B3ITG2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000650597.1	KRT12-205	588	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-	-
ENST00000648126.1	KRT12-203	632	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000648535.1	KRT12-204	614	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Gene: KRT12 ENSG00000187242

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Gene: KRT12 ENSG00000187242

Summary

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