Transcript: ENST00000265404.7 STAP1-201

Description

signal transducing adaptor family member 1 [Source:HGNC Symbol;Acc:HGNC:24133]

Gene Synonyms

BRDG1, STAP-1

Location

Chromosome 4: 67,558,727-67,607,337 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 19 domains and features, is associated with 20224 variant alleles and maps to 464 oligo probes.

Gene

This transcript is a product of gene ENSG00000035720.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000265404.7	STAP1-201	1951	295aa	ENSP00000265404.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3515	A0A024RD91 Q9ULZ2	NM_012108.4	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000396225.1	STAP1-202	1146	295aa	ENSP00000379527.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3515	A0A024RD91 Q9ULZ2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,951 bps, Translation length: 295 residues

MANE

This MANE Select transcript contains ENSP00000265404 and matches to NM_012108.4 and NP_036240.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9ULZ2

CCDS

This transcript is a member of the Human CCDS set: CCDS3515

Transcript Support Level (TSL)

TSL:1

Version

ENST00000265404.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000265404.7 STAP1-201

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Transcript: ENST00000265404.7 STAP1-201

Summary

About Us

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