Human (GRCh38.p14)
Description

lipocalin 2 [Source:HGNC Symbol;Acc:HGNC:6526]

Gene Synonyms

24P3, NGAL

About this transcript

This transcript has 7 exons, is annotated with 176 domains and features, is associated with 2203 variant alleles and maps to 285 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000277480.7LCN2-201820198aaENSP00000277480.2
 
Protein coding
CCDS6892P80188-1 NM_005564.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENST00000373017.5LCN2-203848198aaENSP00000362108.1
 
Protein coding
CCDS6892P80188-1 -GENCODE basicAPPRIS P4TSL:5
ENST00000372998.1LCN2-202631200aaENSP00000362089.1
 
Protein coding
X6R8F3 -GENCODE basicAPPRIS ALT1TSL:5
ENST00000470902.5LCN2-204877No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000494317.1LCN2-207625No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000488391.5LCN2-206485No protein-
 
Retained intron
--TSL:2
ENST00000487719.1LCN2-205427No protein-
 
Retained intron
--TSL:1
Statistics

Exons: 7, Coding exons: 6, Transcript length: 820 bps, Translation length: 198 residues

MANE

This MANE Select transcript contains ENSP00000277480 and matches to NM_005564.5 and NP_005555.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: P80188

CCDS

This transcript is a member of the Human CCDS set: CCDS6892

Transcript Support Level (TSL)

TSL:1

Version

ENST00000277480.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.