Human (GRCh38.p14)
Description

NPL4 homolog, ubiquitin recognition factor [Source:HGNC Symbol;Acc:HGNC:18261]

Gene Synonyms

FLJ20657, KIAA1499, NPL4

Location
About this transcript

This transcript has 17 exons, is annotated with 18 domains and features, is associated with 41741 variant alleles and maps to 588 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000331134.11NPLOC4-2014381608aaENSP00000331487.5
 
Protein coding
CCDS45812Q8TAT6-1 NM_017921.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000374747.9NPLOC4-2025538617aaENSP00000363879.5
 
Protein coding
Q8TAT6-2 -GENCODE basicTSL:2
ENST00000705719.1NPLOC4-2224381651aaENSP00000516165.1
 
Protein coding
A0A994J7H4 -GENCODE basic
ENST00000572760.5NPLOC4-20994656aaENSP00000467400.1
 
Protein coding
K7EJN1 -GENCODE basicTSL:1
ENST00000571714.5NPLOC4-206676182aaENSP00000460465.1
 
Protein coding
I3L3I1 -TSL:5CDS 5' incomplete
ENST00000573519.5NPLOC4-213654145aaENSP00000459457.1
 
Protein coding
I3L281 -TSL:1CDS 5' incomplete
ENST00000573876.1NPLOC4-21456056aaENSP00000465247.1
 
Protein coding
K7EJN1 -GENCODE basicTSL:4
ENST00000572824.1NPLOC4-210559172aaENSP00000458384.1
 
Protein coding
I3L0W3 -TSL:4CDS 5' incomplete
ENST00000625705.1NPLOC4-221405134aaENSP00000486640.1
 
Protein coding
A0A0D9SFI9 -GENCODE basicTSL:5
ENST00000574897.5NPLOC4-2172365135aaENSP00000461543.1
 
Nonsense mediated decay
I3L4U9 -TSL:2
ENST00000573212.5NPLOC4-211564110aaENSP00000459462.1
 
Nonsense mediated decay
I3L283 -TSL:4CDS 5' incomplete
ENST00000570324.1NPLOC4-20441458aaENSP00000461478.1
 
Nonsense mediated decay
I3L4S2 -TSL:3CDS 5' incomplete
ENST00000574344.5NPLOC4-216573No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000574964.1NPLOC4-218572No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000572346.5NPLOC4-207567No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000570300.1NPLOC4-203565No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000572351.1NPLOC4-208460No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000571562.1NPLOC4-205301No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000574095.1NPLOC4-215277No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000576940.1NPLOC4-220216No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000576713.6NPLOC4-219571No protein-
 
Retained intron
--TSL:5
ENST00000573328.5NPLOC4-212428No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 17, Coding exons: 17, Transcript length: 4,381 bps, Translation length: 608 residues

MANE

This MANE Select transcript contains ENSP00000331487 and matches to NM_017921.4 and NP_060391.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TAT6

CCDS

This transcript is a member of the Human CCDS set: CCDS45812

Transcript Support Level (TSL)

TSL:1

Version

ENST00000331134.11

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.