Human (GRCh38.p14)
Description

TATA-box binding protein associated factor, RNA polymerase I subunit C [Source:HGNC Symbol;Acc:HGNC:11534]

Gene Synonyms

MGC:39976, SL1, TAFI110, TAFI95

Location
About this transcript

This transcript has 15 exons, is annotated with 18 domains and features, is associated with 6574 variant alleles and maps to 615 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000566732.6TAF1C-2163847843aaENSP00000455933.1
 
Protein coding
CCDS58489Q15572-6 NM_001243156.2MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P2TSL:2
ENST00000567759.5TAF1C-2183879869aaENSP00000455265.1
 
Protein coding
CCDS32496Q15572-1 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000341690.10TAF1C-2013678775aaENSP00000345305.6
 
Protein coding
CCDS45535Q15572-2 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000541676.5TAF1C-2033502537aaENSP00000437900.2
 
Protein coding
CCDS58488Q15572-4 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000570117.5TAF1C-2222349537aaENSP00000455247.1
 
Protein coding
CCDS58488Q15572-4 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000568265.1TAF1C-2191140380aaENSP00000456101.1
 
Protein coding
H3BR71 -TSL:4CDS 5' and 3' incomplete
ENST00000564345.5TAF1C-210602146aaENSP00000454854.1
 
Protein coding
H3BNH3 -TSL:4CDS 3' incomplete
ENST00000561955.1TAF1C-20557093aaENSP00000456011.1
 
Protein coding
H3BQZ8 -TSL:4CDS 3' incomplete
ENST00000564454.1TAF1C-211555136aaENSP00000457883.1
 
Protein coding
H3BUZ7 -TSL:4CDS 3' incomplete
ENST00000566903.5TAF1C-2172628209aaENSP00000456133.1
 
Nonsense mediated decay
H3BR91 -TSL:5
ENST00000563428.5TAF1C-208253158aaENSP00000455787.1
 
Nonsense mediated decay
H3BQH8 -TSL:2
ENST00000569505.5TAF1C-22056470aaENSP00000457281.1
 
Nonsense mediated decay
H3BTQ6 -TSL:3
ENST00000569609.5TAF1C-22155552aaENSP00000454494.1
 
Nonsense mediated decay
H3BMQ4 -TSL:4
ENST00000565544.1TAF1C-214578No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000564774.5TAF1C-2124637No protein-
 
Retained intron
--TSL:2
ENST00000564208.5TAF1C-2093810No protein-
 
Retained intron
--TSL:2
ENST00000544090.5TAF1C-2042747No protein-
 
Retained intron
--TSL:2
ENST00000537450.5TAF1C-2021318No protein-
 
Retained intron
--TSL:2
ENST00000562330.5TAF1C-2061044No protein-
 
Retained intron
--TSL:3
ENST00000565279.5TAF1C-213912No protein-
 
Retained intron
--TSL:5
ENST00000570270.1TAF1C-223597No protein-
 
Retained intron
--TSL:3
ENST00000566183.1TAF1C-215290No protein-
 
Retained intron
--TSL:3
ENST00000562445.5TAF1C-207259No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 15, Coding exons: 13, Transcript length: 3,678 bps, Translation length: 775 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15572

CCDS

This transcript is a member of the Human CCDS set: CCDS45535

Transcript Support Level (TSL)

TSL:1

Version

ENST00000341690.10

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.