Human (GRCh38.p14)
Description

SSX family member 2 interacting protein [Source:HGNC Symbol;Acc:HGNC:16509]

Gene Synonyms

HMSD1

Location
About this transcript

This transcript has 14 exons, is annotated with 13 domains and features, is associated with 20127 variant alleles and maps to 816 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000342203.8SSX2IP-2015752614aaENSP00000340279.3
 
Protein coding
CCDS699Q9Y2D8-1 NM_001166293.2MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000437941.6SSX2IP-2035843587aaENSP00000412781.2
 
Protein coding
CCDS53337Q9Y2D8-3 -GENCODE basicTSL:2
ENST00000605755.5SSX2IP-2101933587aaENSP00000474480.1
 
Protein coding
CCDS53337Q9Y2D8-3 -GENCODE basicTSL:2
ENST00000603677.1SSX2IP-209114987aaENSP00000473763.1
 
Protein coding
S4R2Y6 -GENCODE basicTSL:1
ENST00000422026.1SSX2IP-202759180aaENSP00000416067.1
 
Protein coding
C9JIX7 -TSL:3CDS 3' incomplete
ENST00000481102.5SSX2IP-2072457560aaENSP00000432261.1
 
Nonsense mediated decay
Q9Y2D8-2 -TSL:5
ENST00000476905.6SSX2IP-2062272504aaENSP00000474925.1
 
Nonsense mediated decay
S4R403 -TSL:2
ENST00000460500.1SSX2IP-2052116No protein-
 
Retained intron
--TSL:5
ENST00000490476.1SSX2IP-208716No protein-
 
Retained intron
--TSL:3
ENST00000459708.1SSX2IP-204453No protein-
 
Retained intron
--TSL:5
Statistics

Exons: 14, Coding exons: 13, Transcript length: 5,752 bps, Translation length: 614 residues

MANE

This MANE Select transcript contains ENSP00000340279 and matches to NM_001166293.2 and NP_001159765.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y2D8

CCDS

This transcript is a member of the Human CCDS set: CCDS699

Transcript Support Level (TSL)

TSL:1

Version

ENST00000342203.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.