Human (GRCh38.p14)
Description

major histocompatibility complex, class II, DQ alpha 1 [Source:HGNC Symbol;Acc:HGNC:4942]

Gene Synonyms

CELIAC1, HLA-DQA

Location
About this transcript

This transcript has 5 exons, is annotated with 52 domains and features, is associated with 4652 variant alleles and maps to 792 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000343139.11HLA-DQA1-2011574255aaENSP00000339398.5
 
Protein coding
CCDS4752A0A173ADG5 P01909 NM_002122.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:NA
ENST00000395363.5HLA-DQA1-2031206255aaENSP00000378767.1
 
Protein coding
CCDS4752A0A173ADG5 P01909 -GENCODE basicAPPRIS P1TSL:NA
ENST00000374949.2HLA-DQA1-2021060255aaENSP00000364087.2
 
Protein coding
CCDS4752A0A173ADG5 P01909 -GENCODE basicAPPRIS P1TSL:NA
ENST00000496318.5HLA-DQA1-207696214aaENSP00000437302.1
 
Protein coding
E9PMV2 -TSL:NACDS 3' incomplete
ENST00000422863.1HLA-DQA1-20452024aaENSP00000405797.1
 
Protein coding
F6UB03 -TSL:NACDS 3' incomplete
ENST00000482745.5HLA-DQA1-206213553aaENSP00000436546.1
 
Nonsense mediated decay
E9PI37 -TSL:NA
ENST00000460633.1HLA-DQA1-2055450No protein-
 
Retained intron
--TSL:NA
Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,574 bps, Translation length: 255 residues

MANE

This MANE Select transcript contains ENSP00000339398 and matches to NM_002122.5 and NP_002113.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: P01909

CCDS

This transcript is a member of the Human CCDS set: CCDS4752

Transcript Support Level (TSL)

TSL:NA

Version

ENST00000343139.11

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.