Human (GRCh38.p14)
Description

LIM zinc finger domain containing 2 [Source:HGNC Symbol;Acc:HGNC:16084]

Gene Synonyms

PINCH-2, PINCH2

About this transcript

This transcript has 10 exons, is annotated with 37 domains and features, is associated with 19099 variant alleles and maps to 570 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000355119.9LIMS2-2022387341aaENSP00000347240.4
 
Protein coding
CCDS54395Q7Z4I7-1 NM_001161403.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000409455.5LIMS2-2052500336aaENSP00000386383.1
 
Protein coding
CCDS54394Q7Z4I7-3 -GENCODE basicTSL:1
ENST00000410011.5LIMS2-2082335336aaENSP00000387002.1
 
Protein coding
CCDS54394Q7Z4I7-3 -GENCODE basicTSL:1
ENST00000409808.6LIMS2-2072315336aaENSP00000386637.2
 
Protein coding
CCDS54394Q7Z4I7-3 -GENCODE basicTSL:5
ENST00000324938.9LIMS2-2012111365aaENSP00000326888.5
 
Protein coding
CCDS2147Q7Z4I7-2 -GENCODE basicTSL:1
ENST00000545738.6LIMS2-2171730363aaENSP00000443794.2
 
Protein coding
CCDS54396Q7Z4I7-5 -GENCODE basicTSL:5
ENST00000410038.5LIMS2-2091695189aaENSP00000386570.1
 
Protein coding
CCDS58725Q7Z4I7-4 -GENCODE basicTSL:2
ENST00000409286.5LIMS2-2041678189aaENSP00000386252.1
 
Protein coding
CCDS58725Q7Z4I7-4 -GENCODE basicTSL:2
ENST00000409754.5LIMS2-2061620189aaENSP00000386345.1
 
Protein coding
CCDS58725Q7Z4I7-4 -GENCODE basicTSL:1
ENST00000426981.5LIMS2-2111409169aaENSP00000397253.1
 
Protein coding
H0Y592 -TSL:3CDS 5' incomplete
ENST00000409254.1LIMS2-203867189aaENSP00000386907.1
 
Protein coding
CCDS58725Q7Z4I7-4 -GENCODE basicTSL:3
ENST00000413578.5LIMS2-21093060aaENSP00000388611.1
 
Nonsense mediated decay
F8WEF3 -TSL:3
ENST00000494613.5LIMS2-2161137No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000582671.1LIMS2-218531No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000469300.6LIMS2-2134807No protein-
 
Retained intron
--TSL:2
ENST00000466410.5LIMS2-2122592No protein-
 
Retained intron
--TSL:2
ENST00000476932.5LIMS2-2142269No protein-
 
Retained intron
--TSL:2
ENST00000484252.5LIMS2-2152099No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,387 bps, Translation length: 341 residues

MANE

This MANE Select transcript contains ENSP00000347240 and matches to NM_001161403.3 and NP_001154875.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7Z4I7

CCDS

This transcript is a member of the Human CCDS set: CCDS54395

Transcript Support Level (TSL)

TSL:1

Version

ENST00000355119.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.