Human (GRCh38.p14)
Description

Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase [Source:HGNC Symbol;Acc:HGNC:30605]

Gene Synonyms

SECS, SLA, SLA-P35, SLA/LP

Location
About this transcript

This transcript has 12 exons, is annotated with 1 domain and feature, is associated with 15654 variant alleles and maps to 643 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000382103.7SEPSECS-2025503501aaENSP00000371535.2
 
Protein coding
CCDS3432Q9HD40-1 NM_016955.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000681948.1SEPSECS-2145802586aaENSP00000505991.1
 
Protein coding
CCDS93487A0A7P0TA23 -GENCODE basic
ENST00000680581.1SEPSECS-2075441343aaENSP00000506483.1
 
Nonsense mediated decay
A0A7P0Z4P3 --
ENST00000358971.7SEPSECS-2013344112aaENSP00000351857.3
 
Nonsense mediated decay
J3KP25 -TSL:1
ENST00000514585.5SEPSECS-205149447aaENSP00000421880.1
 
Nonsense mediated decay
Q9HD40-2 -TSL:1
ENST00000503150.1SEPSECS-20354495aaENSP00000423850.1
 
Nonsense mediated decay
H0Y9D2 -TSL:4CDS 5' incomplete
ENST00000680824.1SEPSECS-2086574No protein-
 
Retained intron
---
ENST00000681341.1SEPSECS-2116401No protein-
 
Retained intron
---
ENST00000681071.1SEPSECS-2095646No protein-
 
Retained intron
---
ENST00000681374.1SEPSECS-2124710No protein-
 
Retained intron
---
ENST00000681166.1SEPSECS-2102547No protein-
 
Retained intron
---
ENST00000681640.1SEPSECS-2132072No protein-
 
Retained intron
---
ENST00000515272.1SEPSECS-206529No protein-
 
Retained intron
--TSL:3
ENST00000505513.1SEPSECS-204420No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 12, Coding exons: 3, Transcript length: 3,344 bps, Translation length: 112 residues

Transcript Support Level (TSL)

TSL:1

Version

ENST00000358971.7

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.