Human (GRCh38.p14)
Description

collagen type VI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2211]

Location
About this transcript

This transcript has 35 exons, is annotated with 39 domains and features, is associated with 16144 variant alleles and maps to 1146 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000361866.8COL6A1-20142031028aaENSP00000355180.3
 
Protein coding
CCDS13727A0A384P5H7 P12109 NM_001848.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000612273.2COL6A1-2071531450aaENSP00000483630.2
 
Protein coding
A0A087X0S5 -TSL:5CDS 5' incomplete
ENST00000682634.1COL6A1-2081390403aaENSP00000507333.1
 
Protein coding
A0A804HJ28 -CDS 5' incomplete
ENST00000463060.6COL6A1-2021471No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000498614.5COL6A1-2062358No protein-
 
Retained intron
--TSL:1
ENST00000486023.1COL6A1-204968No protein-
 
Retained intron
--TSL:2
ENST00000683550.1COL6A1-209505No protein-
 
Retained intron
---
ENST00000466285.1COL6A1-203500No protein-
 
Retained intron
--TSL:3
ENST00000492851.1COL6A1-205435No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 35, Coding exons: 35, Transcript length: 4,203 bps, Translation length: 1,028 residues

MANE

This MANE Select transcript contains ENSP00000355180 and matches to NM_001848.3 and NP_001839.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: P12109

CCDS

This transcript is a member of the Human CCDS set: CCDS13727

Transcript Support Level (TSL)

TSL:1

Version

ENST00000361866.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.