Human (GRCh38.p14)
Description

collagen type XXI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:17025]

Location
About this transcript

This transcript has 5 exons, is annotated with 10 domains and features, is associated with 28685 variant alleles and maps to 124 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000244728.10COL21A1-2014173957aaENSP00000244728.5
 
Protein coding
CCDS55025Q96P44-1 NM_030820.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT1TSL:1
ENST00000370819.5COL21A1-2034094954aaENSP00000359855.1
 
Protein coding
CCDS83099Q96P44-3 -GENCODE basicAPPRIS P4TSL:1
ENST00000370817.3COL21A1-202624136aaENSP00000359853.3
 
Protein coding
A6PVD9 -TSL:3CDS 3' incomplete
ENST00000456983.1COL21A1-204480125aaENSP00000390958.1
 
Protein coding
H0Y4C9 -TSL:3CDS 5' incomplete
ENST00000488912.5COL21A1-211232779aaENSP00000433624.1
 
Nonsense mediated decay
H0YDH6 -TSL:1CDS 5' incomplete
ENST00000467045.5COL21A1-2062291No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000469682.1COL21A1-208778No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000484987.1COL21A1-210598No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000467216.2COL21A1-207277No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000482933.1COL21A1-2091413No protein-
 
Retained intron
--TSL:1
ENST00000461489.1COL21A1-205555No protein-
 
Retained intron
--TSL:4
Statistics

Exons: 5, Coding exons: 2, Transcript length: 624 bps, Translation length: 136 residues

Transcript Support Level (TSL)

TSL:3

Incomplete CDS

CDS 3' incomplete

Version

ENST00000370817.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.