Human (GRCh38.p14)
Description

collagen type IX alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2218]

Gene Synonyms

EDM2, MED

Location
About this transcript

This transcript has 32 exons, is annotated with 42 domains and features, is associated with 8568 variant alleles and maps to 788 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000372748.8COL9A2-2022852689aaENSP00000361834.3
 
Protein coding
CCDS450Q14055 NM_001852.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000417105.6COL9A2-203677143aaENSP00000388493.2
 
Protein coding
H0Y409 -TSL:5CDS 3' incomplete
ENST00000642679.1COL9A2-21249510aaENSP00000495407.1
 
Protein coding
A0A2R8YFT7 -CDS 3' incomplete
ENST00000372736.3COL9A2-20131983aaENSP00000361821.3
 
Protein coding
B1AKJ3 -TSL:3CDS 3' incomplete
ENST00000488463.6COL9A2-208843No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000466267.1COL9A2-206835No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000427563.1COL9A2-204548No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000490132.1COL9A2-209492No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000482722.5COL9A2-2072887No protein-
 
Retained intron
--TSL:1
ENST00000461118.6COL9A2-2051155No protein-
 
Retained intron
--TSL:1
ENST00000496215.5COL9A2-211668No protein-
 
Retained intron
--TSL:5
ENST00000495948.1COL9A2-210423No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 32, Coding exons: 32, Transcript length: 2,852 bps, Translation length: 689 residues

MANE

This MANE Select transcript contains ENSP00000361834 and matches to NM_001852.4 and NP_001843.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14055

CCDS

This transcript is a member of the Human CCDS set: CCDS450

Transcript Support Level (TSL)

TSL:1

Version

ENST00000372748.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

dotter confirmed [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.