Transcript: ENST00000376489.6 IL36G-202

Description

interleukin 36 gamma [Source:HGNC Symbol;Acc:HGNC:15741]

Gene Synonyms

IL-1F9, IL-1H1, IL-1RP2, IL1E, IL1F9, IL1H1

Location

Chromosome 2: 112,978,019-112,985,554 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 12 domains and features, is associated with 3171 variant alleles and maps to 249 oligo probes.

Gene

This transcript is a product of gene ENSG00000136688.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000259205.5	IL36G-201	1211	169aa	ENSP00000259205.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2108	Q9NZH8-1	NM_019618.4	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000376489.6	IL36G-202	989	134aa	ENSP00000365672.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS62992	Q9NZH8-2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000447128.5	IL36G-203	369	38aa	ENSP00000411639.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J681	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 989 bps, Translation length: 134 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NZH8

CCDS

This transcript is a member of the Human CCDS set: CCDS62992

Transcript Support Level (TSL)

TSL:1

Version

ENST00000376489.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000376489.6 IL36G-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000376489.6 IL36G-202

Summary

About Us

Get help

Our sister sites

Follow us