Human (GRCh38.p14)
Description

protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661]

Location
About this transcript

This transcript has 5 exons, is annotated with 65 domains and features, is associated with 405108 variant alleles and maps to 452 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000377865.7PCDH9-20262271237aaENSP00000367096.2
 
Protein coding
CCDS9444Q9HC56-1 NM_203487.3MANE SelectEnsembl CanonicalGENCODE basicTSL:1
ENST00000377861.4PCDH9-201282271032aaENSP00000367092.3
 
Protein coding
CCDS81769Q5VT82 -GENCODE basicTSL:1
ENST00000544246.5PCDH9-20462341203aaENSP00000442186.2
 
Protein coding
CCDS9443Q9HC56-2 -GENCODE basicAPPRIS P1TSL:1
ENST00000456367.5PCDH9-20350721195aaENSP00000401699.2
 
Protein coding
CCDS81770B7ZM79 -GENCODE basicTSL:1
ENST00000614931.1PCDH9-20546144aaENSP00000482917.1
 
Nonsense mediated decay
A0A087WZW0 -TSL:1CDS 5' incomplete
ENST00000617020.1PCDH9-206559No protein-
 
Protein coding CDS not defined
--TSL:5
Statistics

Exons: 5, Coding exons: 4, Transcript length: 6,227 bps, Translation length: 1,237 residues

MANE

This MANE Select transcript contains ENSP00000367096 and matches to NM_203487.3 and NP_982354.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9HC56

CCDS

This transcript is a member of the Human CCDS set: CCDS9444

Transcript Support Level (TSL)

TSL:1

Version

ENST00000377865.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.