Human (GRCh38.p14)
Description

major histocompatibility complex, class II, DQ alpha 1 [Source:HGNC Symbol;Acc:HGNC:4942]

Gene Synonyms

CELIAC1, HLA-DQA

Location
About this transcript

This transcript has 5 exons, is annotated with 52 domains and features, is associated with 4638 variant alleles and maps to 771 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000343139.11HLA-DQA1-2011574255aaENSP00000339398.5
 
Protein coding
CCDS4752A0A173ADG5 P01909 NM_002122.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:NA
ENST00000395363.5HLA-DQA1-2031206255aaENSP00000378767.1
 
Protein coding
CCDS4752A0A173ADG5 P01909 -GENCODE basicAPPRIS P1TSL:NA
ENST00000374949.2HLA-DQA1-2021060255aaENSP00000364087.2
 
Protein coding
CCDS4752A0A173ADG5 P01909 -GENCODE basicAPPRIS P1TSL:NA
ENST00000496318.5HLA-DQA1-207696214aaENSP00000437302.1
 
Protein coding
E9PMV2 -TSL:NACDS 3' incomplete
ENST00000422863.1HLA-DQA1-20452024aaENSP00000405797.1
 
Protein coding
F6UB03 -TSL:NACDS 3' incomplete
ENST00000482745.5HLA-DQA1-206213553aaENSP00000436546.1
 
Nonsense mediated decay
E9PI37 -TSL:NA
ENST00000460633.1HLA-DQA1-2055450No protein-
 
Retained intron
--TSL:NA
Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,206 bps, Translation length: 255 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P01909

CCDS

This transcript is a member of the Human CCDS set: CCDS4752

Transcript Support Level (TSL)

TSL:NA

Version

ENST00000395363.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.