Human (GRCh38.p14)
Description

tRNA nucleotidyl transferase 1 [Source:HGNC Symbol;Acc:HGNC:17341]

Gene Synonyms

CCA1, CGI-47, MTCCA

Location
About this transcript

This transcript has 3 exons, is annotated with 1 domain and feature, is associated with 5853 variant alleles and maps to 165 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000251607.11TRNT1-2012252434aaENSP00000251607.6
 
Protein coding
CCDS2561Q96Q11-1 NM_182916.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000698412.1TRNT1-2277518434aaENSP00000513705.1
 
Protein coding
CCDS2561Q96Q11-1 -GENCODE basicAPPRIS P1
ENST00000698414.1TRNT1-2296343473aaENSP00000513707.1
 
Protein coding
A0A8V8TM71 -GENCODE basic
ENST00000698413.1TRNT1-2285735473aaENSP00000513706.1
 
Protein coding
A0A8V8TM71 -GENCODE basic
ENST00000698411.1TRNT1-226384672aaENSP00000513704.1
 
Protein coding
A0A8V8TN57 -GENCODE basic
ENST00000465998.2TRNT1-209368472aaENSP00000513702.1
 
Protein coding
A0A8V8TN57 -GENCODE basicTSL:4
ENST00000698406.1TRNT1-2212368434aaENSP00000513700.1
 
Protein coding
CCDS2561Q96Q11-1 -GENCODE basicAPPRIS P1
ENST00000280591.10TRNT1-2022180414aaENSP00000280591.6
 
Protein coding
CCDS77691Q96Q11-2 -GENCODE basicTSL:1
ENST00000402675.5TRNT1-205193557aaENSP00000385745.1
 
Protein coding
Q96Q11-3 -GENCODE basicTSL:2
ENST00000339437.11TRNT1-20398757aaENSP00000342985.6
 
Protein coding
Q96Q11-3 -GENCODE basicTSL:1
ENST00000420393.5TRNT1-20785457aaENSP00000400394.1
 
Protein coding
Q96Q11-3 -GENCODE basicTSL:3
ENST00000397779.3TRNT1-204541140aaENSP00000380881.3
 
Protein coding
F8W8C3 -TSL:5CDS 3' incomplete
ENST00000413000.1TRNT1-20648362aaENSP00000388615.1
 
Protein coding
C9JRS7 -TSL:4CDS 3' incomplete
ENST00000698410.1TRNT1-2257501129aaENSP00000513703.1
 
Nonsense mediated decay
A0A494C0A0 --
ENST00000698408.1TRNT1-2232569434aaENSP00000513701.1
 
Nonsense mediated decay
CCDS2561Q96Q11-1 --
ENST00000650839.1TRNT1-2142147213aaENSP00000498970.1
 
Nonsense mediated decay
A0A494C1D4 --
ENST00000651591.1TRNT1-219210665aaENSP00000498240.1
 
Nonsense mediated decay
A0A494BZV5 --
ENST00000652340.1TRNT1-220196779aaENSP00000498624.1
 
Nonsense mediated decay
A0A494C0N8 -CDS 5' incomplete
ENST00000650755.1TRNT1-212193451aaENSP00000499122.1
 
Nonsense mediated decay
A0A494C1P4 --
ENST00000651316.1TRNT1-2171911147aaENSP00000498787.1
 
Nonsense mediated decay
A0A494C0Y2 --
ENST00000650814.1TRNT1-213187471aaENSP00000499120.1
 
Nonsense mediated decay
A0A494C1L4 -CDS 5' incomplete
ENST00000434583.5TRNT1-2081871434aaENSP00000415100.1
 
Nonsense mediated decay
CCDS2561Q96Q11-1 -TSL:2
ENST00000651352.1TRNT1-2181168129aaENSP00000498449.1
 
Nonsense mediated decay
A0A494C0A0 --
ENST00000651093.1TRNT1-2161113206aaENSP00000498942.1
 
Nonsense mediated decay
A0A494C181 --
ENST00000469632.1TRNT1-210867No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000650989.1TRNT1-215799No protein-
 
Protein coding CDS not defined
---
ENST00000698415.1TRNT1-2306597No protein-
 
Retained intron
---
ENST00000698407.1TRNT1-2225865No protein-
 
Retained intron
---
ENST00000698416.1TRNT1-2315500No protein-
 
Retained intron
---
ENST00000698409.1TRNT1-2241259No protein-
 
Retained intron
---
ENST00000482311.1TRNT1-211447No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 3, Coding exons: 2, Transcript length: 483 bps, Translation length: 62 residues

Transcript Support Level (TSL)

TSL:4

Incomplete CDS

CDS 3' incomplete

Version

ENST00000413000.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.