Transcript: ENST00000414504.6 ATXN8OS-201

Description

ATXN8 opposite strand lncRNA [Source:HGNC Symbol;Acc:HGNC:10561]

Gene Synonyms

KLHL1AS, NCRNA00003, SCA8

Location

Chromosome 13: 70,107,213-70,139,429 forward strand.

About this transcript

This transcript has 5 exons, is associated with 15118 variant alleles and maps to 296 oligo probes.

Gene

This transcript is a product of gene ENSG00000230223.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000678624.1	ATXN8OS-206	2559	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000660386.1	ATXN8OS-203	2188	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000665905.1	ATXN8OS-204	1916	No protein	-	lncRNA	-	-
ENST00000424524.2	ATXN8OS-202	1752	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000677785.1	ATXN8OS-205	1433	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000414504.6	ATXN8OS-201	1148	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,148 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000414504.6

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000414504.6 ATXN8OS-201

Summary

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Transcript: ENST00000414504.6 ATXN8OS-201

Summary

About Us

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