Human (GRCh38.p14)
Description

high mobility group 20B [Source:HGNC Symbol;Acc:HGNC:5002]

Gene Synonyms

BRAF25, BRAF35, HMGX2, HMGXB2, SMARCE1R, SOXL

Location
About this transcript

This transcript has 5 exons, is annotated with 15 domains and features, is associated with 1918 variant alleles and maps to 321 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000333651.11HMG20B-2021585317aaENSP00000328269.6
 
Protein coding
CCDS45919Q9P0W2-1 NM_006339.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000262949.7HMG20B-201886286aaENSP00000262949.7
 
Protein coding
B5MDG7 -TSL:5CDS 3' incomplete
ENST00000453933.5HMG20B-206759142aaENSP00000402877.1
 
Protein coding
C9JQA7 -TSL:2CDS 3' incomplete
ENST00000585900.1HMG20B-216741184aaENSP00000465293.1
 
Protein coding
K7EJR8 -TSL:3CDS 5' incomplete
ENST00000416526.5HMG20B-203711215aaENSP00000410924.1
 
Protein coding
C9J8X5 -TSL:3CDS 3' incomplete
ENST00000417382.5HMG20B-204561165aaENSP00000393904.1
 
Protein coding
C9K049 -TSL:4CDS 3' incomplete
ENST00000435022.5HMG20B-205616125aaENSP00000393481.1
 
Nonsense mediated decay
F8WES5 -TSL:5
ENST00000585741.1HMG20B-215363No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000488973.6HMG20B-2132434No protein-
 
Retained intron
--TSL:1
ENST00000487894.5HMG20B-2121242No protein-
 
Retained intron
--TSL:2
ENST00000464304.1HMG20B-208881No protein-
 
Retained intron
--TSL:2
ENST00000493191.1HMG20B-214852No protein-
 
Retained intron
--TSL:3
ENST00000470356.3HMG20B-209806No protein-
 
Retained intron
--TSL:1
ENST00000486028.1HMG20B-211719No protein-
 
Retained intron
--TSL:2
ENST00000461099.1HMG20B-207687No protein-
 
Retained intron
--TSL:2
ENST00000483417.1HMG20B-210580No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 5, Coding exons: 4, Transcript length: 561 bps, Translation length: 165 residues

Transcript Support Level (TSL)

TSL:4

Incomplete CDS

CDS 3' incomplete

Version

ENST00000417382.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.