Human (GRCh38.p14)
Description

SP140 nuclear body protein [Source:HGNC Symbol;Acc:HGNC:17133]

Gene Synonyms

LYSP100-A, LYSP100-B

About this transcript

This transcript has 24 exons, is annotated with 30 domains and features, is associated with 36318 variant alleles and maps to 857 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000392045.8SP140-2033244867aaENSP00000375899.3
 
Protein coding
CCDS42831Q13342-1 NM_007237.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT2TSL:2
ENST00000420434.7SP140-2053169840aaENSP00000398210.3
 
Protein coding
CCDS63150Q13342-5 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000343805.10SP140-2012910807aaENSP00000342096.6
 
Protein coding
CCDS63151Q13342-6 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000417495.7SP140-2042895753aaENSP00000393618.3
 
Protein coding
CCDS63149Q13342-3 -GENCODE basicAPPRIS P2TSL:1
ENST00000373645.3SP140-202814172aaENSP00000362749.3
 
Protein coding
CCDS33392Q13342-4 -GENCODE basicTSL:1
ENST00000456542.5SP140-20758029aaENSP00000475284.1
 
Protein coding
U3KPV9 -TSL:4CDS 3' incomplete
ENST00000544128.5SP140-214910No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000538494.1SP140-212629No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000441657.1SP140-206387No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000473711.1SP140-208644No protein-
 
Retained intron
--TSL:2
ENST00000543928.5SP140-213640No protein-
 
Retained intron
--TSL:2
ENST00000479539.1SP140-210550No protein-
 
Retained intron
--TSL:5
ENST00000486750.1SP140-211537No protein-
 
Retained intron
--TSL:5
ENST00000476126.1SP140-209463No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 24, Coding exons: 24, Transcript length: 2,895 bps, Translation length: 753 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13342

CCDS

This transcript is a member of the Human CCDS set: CCDS63149

Transcript Support Level (TSL)

TSL:1

Version

ENST00000417495.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.