Human (GRCh38.p14)
Description

collagen type XVII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2194]

Gene Synonyms

BP180, BPAG2

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 755 variant alleles and maps to 168 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000648076.2COL17A1-20856121497aaENSP00000497653.1
 
Protein coding
CCDS7554Q9UMD9-1 NM_000494.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT2
ENST00000369733.8COL17A1-20151971415aaENSP00000358748.3
 
Protein coding
Q9UMD9-2 -GENCODE basicAPPRIS P4TSL:5
ENST00000650263.1COL17A1-2101915604aaENSP00000497850.1
 
Protein coding
A0A3B3ITM2 -CDS 3' incomplete
ENST00000393211.3COL17A1-2021610417aaENSP00000376905.3
 
Protein coding
A2A2Y8 -GENCODE basicTSL:1
ENST00000433822.1COL17A1-20353766aaENSP00000388832.1
 
Protein coding
H0Y420 -TSL:5CDS 5' incomplete
ENST00000647647.1COL17A1-207164063aaENSP00000497865.1
 
Nonsense mediated decay
A0A3B3ITP5 -CDS 5' incomplete
ENST00000488320.1COL17A1-206626152aaENSP00000497253.1
 
Nonsense mediated decay
A0A3B3ISI7 -TSL:5CDS 5' incomplete
ENST00000483876.1COL17A1-205622122aaENSP00000498135.1
 
Nonsense mediated decay
A0A3B3IUC2 -TSL:5CDS 5' incomplete
ENST00000649118.1COL17A1-2091513No protein-
 
Retained intron
---
ENST00000480127.2COL17A1-204414No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 4, Coding exons: 3, Transcript length: 537 bps, Translation length: 66 residues

Transcript Support Level (TSL)

TSL:5

Incomplete CDS

CDS 5' incomplete

Version

ENST00000433822.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.