Human (GRCh38.p14)
Description

core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24337]

Gene Synonyms

C1GALT, T-SYNTHASE

Location
About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 34030 variant alleles and maps to 466 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000436587.7C1GALT1-2046275363aaENSP00000389176.2
 
Protein coding
CCDS5355Q9NS00-1 NM_020156.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:5
ENST00000223122.4C1GALT1-2011777363aaENSP00000223122.2
 
Protein coding
CCDS5355Q9NS00-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000402468.3C1GALT1-202930309aaENSP00000384550.3
 
Protein coding
Q9NS00-2 -GENCODE basicTSL:1
ENST00000429911.5C1GALT1-203802131aaENSP00000407666.1
 
Protein coding
C9K0C8 -TSL:5CDS 3' incomplete
ENST00000467716.1C1GALT1-205458No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000476068.1C1GALT1-2061186No protein-
 
Retained intron
--TSL:1
Statistics

Exons: 4, Coding exons: 3, Transcript length: 6,275 bps, Translation length: 363 residues

MANE

This MANE Select transcript contains ENSP00000389176 and matches to NM_020156.5 and NP_064541.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NS00

CCDS

This transcript is a member of the Human CCDS set: CCDS5355

Transcript Support Level (TSL)

TSL:5

Version

ENST00000436587.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.