Human (GRCh38.p14)
Description

integrin subunit alpha 6 [Source:HGNC Symbol;Acc:HGNC:6142]

Gene Synonyms

CD49F, ITGA6A, ITGA6B, VLA-6

About this transcript

This transcript has 25 exons, is annotated with 37 domains and features, is associated with 32000 variant alleles and maps to 875 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000684293.1ITGA6-21258161073aaENSP00000508249.1
 
Protein coding
CCDS2249P23229-2 NM_000210.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P3
ENST00000442250.6ITGA6-20658031130aaENSP00000406694.1
 
Protein coding
CCDS92897P23229-1 NM_001394928.1MANE Plus ClinicalGENCODE basicTSL:5
ENST00000409080.6ITGA6-20256861091aaENSP00000386896.1
 
Protein coding
CCDS46451P23229-3 -GENCODE basicAPPRIS ALT1TSL:2
ENST00000264107.12ITGA6-20154881058aaENSP00000264107.8
 
Protein coding
CCDS92898A0A8C8KBL6 -GENCODE basicTSL:1
ENST00000409532.5ITGA6-2033544954aaENSP00000386614.1
 
Protein coding
CCDS82534P23229-7 -GENCODE basicTSL:2
ENST00000458358.5ITGA6-20732611086aaENSP00000394169.1
 
Protein coding
P23229-5 -GENCODE basicTSL:5
ENST00000412899.5ITGA6-204970231aaENSP00000413470.1
 
Protein coding
C9JXX7 -TSL:1CDS 3' incomplete
ENST00000416789.1ITGA6-205853258aaENSP00000388435.1
 
Protein coding
H7BZ97 -TSL:3CDS 5' incomplete
ENST00000469534.1ITGA6-208581No protein-
 
Retained intron
--TSL:2
ENST00000475302.1ITGA6-210577No protein-
 
Retained intron
--TSL:3
ENST00000497107.1ITGA6-211573No protein-
 
Retained intron
--TSL:2
ENST00000470259.1ITGA6-209365No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 25, Coding exons: 25, Transcript length: 3,261 bps, Translation length: 1,086 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P23229

Transcript Support Level (TSL)

TSL:5

Version

ENST00000458358.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.