Human (GRCh38.p14)
Description

SMG5 nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:24644]

Gene Synonyms

EST1B, KIAA1089, LPTS-RP1, LPTSRP1, RP11-54H19.7, SMG-5

About this transcript

This transcript has 2 exons, is associated with 335 variant alleles and maps to 140 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000361813.5SMG5-20145591016aaENSP00000355261.5
 
Protein coding
CCDS1137Q9UPR3 NM_015327.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000489907.2SMG5-205535No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000476954.1SMG5-2041161No protein-
 
Retained intron
--TSL:2
ENST00000473643.1SMG5-203541No protein-
 
Retained intron
--TSL:2
ENST00000468993.1SMG5-202345No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 2, Coding exons: 0, Transcript length: 345 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000468993.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.